Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001515345.1_202015-12-19] 669 sequences; 34,880,193 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq3 89.7 5e-13 seq8 87.8 2e-12 seq4 86.0 6e-12 >seq3 Length=2393285 Score = 89.7 bits (98), Expect = 5e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 131932 CTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAATA 131991 ||| || || |||||||||||| | ||||| |||||| ||||| ||||| | | Sbjct 1619109 CTCCTTCTGGATGTTGTAGTCGGAGAGCGTACGTCCATCTTCCAGCTGCTTACCAGCGAA 1619168 Query 131992 GATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAACTG 132051 ||| |||||||| ||||| || || ||||| || ||||| ||| || | || | | Sbjct 1619169 GATGAGACGCTGCTGATCCGGGGGAATGCCCTCCTTATCTTGAATCTTGTTCTTGACGTT 1619228 Query 132052 TTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAT 132111 || | ||||| | |||||| || | ||| | ||| || || || ||||| || | Sbjct 1619229 ATCAATGGTATCCGAGCTCTCCACCTCCAGCGTAATCGTCTTGCCGGTGAGAGTCTTCAC 1619288 Query 132112 GAAAATCTGCAT 132123 ||| |||||||| Sbjct 1619289 GAAGATCTGCAT 1619300 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/195 (71%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 || || || ||||||||||||||| || |||||| ||| || | ||| ||||| | | Sbjct 1619335 GATTCCTTCTGAATGTTGTAGTCGGACAAGGTACGGCCATCCTCCAACTGCTTACCAGCA 1619394 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| | |||||| || || || || |||||||| || || | | | || || | ||| Sbjct 1619395 AAGATCAAACGCTGCTGGTCCGGGGGAATGCCTTCCTTGTC-TTGAATCTTGGTCTTAAC 1619453 Query 132050 -TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 132108 | || | || |||| | || ||||| | || | ||| || || || |||||||| Sbjct 1619454 GTTATCGATGGTGTCGGAAGATTCAACTTCCAATGTGATCGTCTTGCCCGTAAGAGTTTT 1619513 Query 132109 TATGAAAATCTGCAT 132123 | ||| |||||||| Sbjct 1619514 GACGAAGATCTGCAT 1619528 >seq8 Length=1782630 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/225 (69%), Gaps = 2/225 (1%) Strand=Plus/Minus Query 47046 GAGGCGGTGAGCATCGAAAAGGAGTTTTTTACTGCGGCGCTGCCCGTCGCCTTGCTGGGC 47105 ||||| || |||| || ||||||| | |||| || |||||| || | |||||| Sbjct 104461 GAGGCCGTCGGCATTGAGCAGGAGTTCCTGACTGACGCTCTGCCCTGTGCTCTCCTGGGC 104402 Query 47106 ATGAACGCACAGTCTATGTGCGAATATATTGAGTTTGTGGCGGATCGTCTGTTGGTGCAG 47165 |||||| | || |||||| | || || ||||| || ||||| || ||||||||| Sbjct 104401 ATGAACTCCAAGCTGATGTGCCAGTACATCGAGTTCGTCGCGGACCGCCTGTTGGTGGCC 104342 Query 47166 CTCGGACAAC-CGAAATATTTTAATGCTCGTAATCCGTTTGAGTTTATGAACAACATTTC 47224 ||||| |||| ||| || | || || || || || || || ||| | || || Sbjct 104341 CTCGG-CAACAAGAAGTACTACAACGCCACCAACCCCTTCGACTTCATGGAGTCGATCTC 104283 Query 47225 GCTCGAGGGCAAAACCAATTTTTTCGAGAAACGAGTCGGAGAGTA 47269 ||| | ||| || ||||| || |||||||| || || || || || Sbjct 104282 GCTGGCGGGTAAGACCAACTTCTTCGAGAAGCGGGTGGGTGACTA 104238 >seq4 Length=2386931 Score = 86.0 bits (94), Expect = 6e-12 Identities = 97/126 (77%), Gaps = 3/126 (2%) Strand=Plus/Minus Query 51745 CCAAG-TCGCCGACGTGGCGCATCGCCGCGTTCGG-AGCGCCGTGGTCGCTGCCGGTGGG 51802 ||||| || |||||||| ||| ||| || |||| ||| |||||| ||||| ||| Sbjct 1615711 CCAAGGTCACCGACGTGACGC-TCGTCGTCCTCGGGAGCACCGTGGGTCTTGCCGAAGGG 1615653 Query 51803 GTTGAAGTGTTCGCCCGCCGACGTGCAGCCGTTGCTGGTGTCGCCGAATTCGTGCACGTG 51862 ||||||||| ||| || || |||||||||||| || |||| ||||| | ||| ||||| Sbjct 1615652 GTTGAAGTGAGGGCCAGCGGAGGTGCAGCCGTTGGTGTTGTCACCGAACTGGTGGACGTG 1615593 Query 51863 GAATCC 51868 ||| || Sbjct 1615592 GAAGCC 1615587 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476607214338840