Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001515345.1_202015-12-19] 669 sequences; 34,880,193 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq8 82.4 9e-11 >seq8 Length=1782630 Score = 82.4 bits (90), Expect = 9e-11 Identities = 182/271 (67%), Gaps = 4/271 (1%) Strand=Plus/Minus Query 147234 CTGGTCCACGCCCTGGCCCCCGTAGTTTGTCCCGCAGTCCACGTACCTGGCCCCAAAGTG 147293 ||| ||||| || || || ||| | |||| ||| ||||| ||||| || || Sbjct 1612110 CTGATCCACACCTTGCCCGGTGTAATCTGTCTTAGCGTCGACGTATTCCGCCCCGAAATG 1612051 Query 147294 CCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTGCGAGAAGCCCGC 147353 ||||| |||||||||||||| || |||||||||||| | | |||||||| || | Sbjct 1612050 TCTCCATTGGAAGCCGTACACGGGGCCCAGGTCGCCGACTTCCCGGTGCGAGAGACCGAC 1611991 Query 147354 CCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCA--CTCCCTTGGCGGAG 147411 | ||| | ||| | || |||| | |||||||||| | | | ||| || ||| Sbjct 1611990 TTTGTCGAGGTATTCGCGCGAGCCGTTGCCGTCCCAGATTTTGATCCCCGCTTCGCTGAG 1611931 Query 147412 AGCTCCTTAGAGTCCGTGGAGCCCCGGATGAACCAGAGCAGCTCCTCCAAAACCCCCCTC 147471 | | | |||| || | ||| |||||||||||| || || | | || | | | Sbjct 1611930 GGGTAC--AGAGGAGGTCGTGCCGGAGATGAACCAGAGGAGTTCGGCGAGGACGGCGCGC 1611873 Query 147472 CAAAAGACCCTCTTGGTGGTCAGCAGGGGGa 147502 ||||||| |||||||| || ||||||| Sbjct 1611872 AGGAAGACCCGTTTGGTGGTTAGGAGGGGGA 1611842 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583483120581600