Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001515345.1_202015-12-19] 669 sequences; 34,880,193 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq8 174 2e-37 seq1 87.8 3e-11 >seq8 Length=1782630 Score = 174 bits (192), Expect = 2e-37 Identities = 221/299 (74%), Gaps = 5/299 (2%) Strand=Plus/Minus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||| ||| | |||||| || |||||||||||||| || ||||||||||||||| | || | Sbjct 105133 GATCTGGCAGATGTAC-AAGAAGGCCGAGGCCTCTTTCTGGACCGCCGAGGAGATTGATC 105075 Query 1455835 TCGGCGCCGACACGGTCCACTGGGTGT--CGC-TGAGCGACGACGAGCGCCATTTCATCA 1455891 | | || | | | ||| ||| ||| ||||||||||||| | |||||| Sbjct 105074 TTTCCAAGGATTTGCACGATTGGCACAACCGCCTGAACGACGACGAGCGCTACTTCATCT 105015 Query 1455892 AGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGC 1455951 ||||| ||||| || || ||| ||| ||||||||| || ||||||||| | || Sbjct 105014 CCCACGTTCTCGCGTTCTT-CGCTGCCTCCGATGGCATTGTCAACGAGAACCTCGTCGAG 104956 Query 1455952 CGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCC 1456011 ||||| | |||||||| | || ||||| |||| || ||||| ||||||||| Sbjct 104955 CGCTTCAGCGGCGAGGTCCAGGTTCCTGAGGCTCGTTGCTTCTACGGTTTCCAGATCATG 104896 Query 1456012 ATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCC 1456070 || || ||||||||||| || |||||||| ||||| ||||| |||||| ||||||| || Sbjct 104895 ATGGAGAACATCCACTCCGAGACCTACTCTCTCCTCATCGATACCTACATCAAGGAGCC 104837 Score = 141 bits (156), Expect = 1e-27 Identities = 190/259 (73%), Gaps = 4/259 (2%) Strand=Plus/Minus Query 1456523 ATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGGCG 1456582 ||||||||||||||||||| || ||| | ||||| | | || | ||||| || Sbjct 104470 ATCATCGTCGAGGCCGTCGGCATTGAGCAGGAGTTCCTGACTGACGCTCTGCCCTGTGCT 104411 Query 1456583 CTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCC 1456642 ||| | ||||||||| ||| ||| |||||||||||||| || || ||||| ||||||| Sbjct 104410 CTCCTGGGCATGAACTCCAA-GCTGATGTGCCAGTACATCGAGTTC-GTCGCGGACCGCC 104353 Query 1456643 TGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGATG 1456702 || | | ||| |||||| | ||||| ||||| | ||||||| ||| | ||| Sbjct 104352 TGTTGGTGGCCCTCGGCAACA-AGAAGTACTACAACGCCACCAACCCCTTCGACTTCATG 104294 Query 1456703 GAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGT-GGCGAGTACGCC 1456761 |||| ||||||||| | ||| ||||||||||| |||||| || || || || ||| Sbjct 104293 GAGTCGATCTCGCTGGCGGGTAAGACCAACTTCTTCGAGAAGCGGGTGGGTGACTACCAG 104234 Query 1456762 AAGGCCGGCGTCACCGCCA 1456780 ||||| || |||| |||| Sbjct 104233 AAGGCTGGTGTCATGGCCA 104215 Score = 89.7 bits (98), Expect = 7e-12 Identities = 117/157 (75%), Gaps = 9/157 (6%) Strand=Plus/Minus Query 1456123 AAAAAGGCCGACTGGGCGATGAAGTGGATCAACAAGGAGGGCCTCGACACTTTGCCGAGC 1456182 || |||||||| ||||| || ||||||||| | | |||| || || ||| || ||| Sbjct 104731 AAGAAGGCCGATTGGGCCATCAAGTGGATCCAGGAC-AGGGAATCTAC-CTTCGCTCAGC 104674 Query 1456183 GGCTCGTCGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGC---CA 1456238 | ||||| | || || || || ||||| || || ||||| || || || ||| || Sbjct 104673 GTCTCGTTGCTTTCGCTGCCGTTGAGGGTATTTTCTTCTCCGG---TTCCTTCGCTTCCA 104617 Query 1456239 TCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCT 1456275 |||| |||||||||||||| || |||||||| ||||| Sbjct 104616 TCTTCTGGCTCAAGAAGCGTGGTCTCATGCCTGGTCT 104580 >seq1 Length=3905891 Score = 87.8 bits (96), Expect = 3e-11 Identities = 77/96 (80%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 165768 GGCGCCGTCGGTGCGCGCACCACCGAGAGCCAGGTGCACCGCGAGATGGCGTCGGCGCTG 165827 |||||||| ||||| |||||||||||| |||||| ||||| ||| |||| |||| ||| Sbjct 1237577 GGCGCCGTTGGTGCTCGCACCACCGAGTCCCAGGTCCACCGTGAGCTGGCTTCGGGTCTG 1237518 Query 165828 CCGCTGCCCATTGGCTTCAAAAACAGCACCGACGGC 165863 | | ||| |||| ||||| || ||||||||||| Sbjct 1237517 TCCTTCCCCGTTGGTTTCAAGAATGGCACCGACGGC 1237482 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177746673720378