Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20niger_20[genbank_20GCA_5F001515345.1_202015-12-19]
669 sequences; 34,880,193 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq3 132 4e-26
seq1 87.8 2e-12
>seq3
Length=2393285
Score = 132 bits (146), Expect = 4e-26
Identities = 144/191 (75%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605
||||| ||||||||||| |||| |||||| || | || |||| ||||||||| |||||
Sbjct 1619338 TCCTTCTGAATGTTGTAGTCGGACAAGGTACGGCCATCCTCCAACTGCTTACCAGCAAAG 1619397
Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665
||||| ||||||||||||| |||| || |||||||| ||||| ||| | |
Sbjct 1619398 ATCAAACGCTGCTGGTCCGGGGGAATGCCTTCCTTGTCTTGAATCTTGGTCTTAACGTTA 1619457
Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725
| | |||||| ||||| || |||| |||||||| || ||||| | |||||| ||
Sbjct 1619458 TCGATGGTGTCGGAAGATTCAACTTCCAATGTGATCGTCTTGCCCGTAAGAGTTTTGACG 1619517
Query 35726 AATATCTGCAT 35736
|| ||||||||
Sbjct 1619518 AAGATCTGCAT 1619528
Score = 105 bits (116), Expect = 6e-18
Identities = 164/233 (70%), Gaps = 6/233 (3%)
Strand=Plus/Plus
Query 35507 TTTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCG 35566
||||| ||||| | | | ||||| || | || |||||||| || |||||||| |||
Sbjct 1619071 TTTCCGCCACGGAGACGGAGCACCAGGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCG 1619130
Query 35567 GCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAA 35626
| | || || | || |||||||||||||| || || || | |||||||| ||||
Sbjct 1619131 GAGAGCGTACGTCCATCTTCCAGCTGCTTACCAGCGAAGATGAGACGCTGCTGATCCGGG 1619190
Query 35627 GGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTC---GCTCGAT 35683
|||| || |||||| || ||||| | ||| | | | | || || ||||
Sbjct 1619191 GGAATGCCCTCCTTATCTTGAATCTTGTTCTTGACGTTATCAATGGTATCCGAGCTC--- 1619247
Query 35684 TCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|||||||||| ||| ||||| || || || | ||| ||||| || ||||||||
Sbjct 1619248 TCCACCTCCAGCGTAATCGTCTTGCCGGTGAGAGTCTTCACGAAGATCTGCAT 1619300
Score = 93.3 bits (102), Expect = 4e-14
Identities = 122/169 (72%), Gaps = 0/169 (0%)
Strand=Plus/Plus
Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605
|||||||| |||||||| || | || ||| || | || ||||||||||| ||||| ||
Sbjct 1619566 TCCTTTTGGATGTTGTAGTCAGACAGGGTACGGCCATCCTCCAGCTGCTTTCCCGCGAAG 1619625
Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665
|| | ||||||||||| | ||| | | |||||||||| ||||| ||||| | |
Sbjct 1619626 ATGAGACGCTGCTGGTCGGGAGGGATACCCTCCTTGTCCTGAATCTTAGTCTTCACATTG 1619685
Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCA 35714
| | ||||| || |||||||| | ||||| || || || ||||
Sbjct 1619686 TCGATAGTGTCAGAAGACTCCACCTCAAGGGTGATGGTCTTTCCGGTCA 1619734
Score = 82.4 bits (90), Expect = 7e-11
Identities = 119/168 (71%), Gaps = 0/168 (0%)
Strand=Plus/Plus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| || |||||||| || | ||| || | || ||||||||||| || || ||
Sbjct 1619866 CTCCTTCTGGATGTTGTAGTCACTAAGGGTGCGGCCATCCTCCAGCTGCTTTCCAGCGAA 1619925
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|||| || |||||||| | ||| | || |||||| ||| |||||| ||| | | |
Sbjct 1619926 GATCAGACGTTGCTGGTCGGGAGGGATGCCCTCCTTATCCTGGATCTTGGTCTTAACATT 1619985
Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGT 35712
| | || |||||||| || ||||| | ||||| || || || ||
Sbjct 1619986 GTCGATGGTATCGCTCGACTCGACCTCGAGGGTGATGGTCTTGCCGGT 1620033
>seq1
Length=3905891
Score = 87.8 bits (96), Expect = 2e-12
Identities = 121/167 (72%), Gaps = 2/167 (1%)
Strand=Plus/Plus
Query 35547 CCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATA 35606
|||| || |||||||| ||| || ||| || | || || ||||||||||| || || |
Sbjct 455430 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGA 455489
Query 35607 TCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG 35666
| | |||||||| |||| || | | |||||||||| |||||| ||| | ||||
Sbjct 455490 TAAGACGCTGCTGATCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGTCTTGA-CGTTG 455548
Query 35667 -CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGT 35712
| | ||||||||||| || || || | || || || ||||||||
Sbjct 455549 TCGATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGT 455595
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450789830238520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |