Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001515345.1_202015-12-19] 669 sequences; 34,880,193 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq3 141 1e-28 seq8 96.9 5e-15 >seq3 Length=2393285 Score = 141 bits (156), Expect = 1e-28 Identities = 465/719 (65%), Gaps = 8/719 (1%) Strand=Plus/Plus Query 69517 TCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGAC 69576 ||||| ||||| || | |||||| |||| ||||| ||| || || || | || | | Sbjct 276523 TCGAACTCATCACCGTAGACATCAGCCAAGCCAGGGGCTTCGTTGGGGCAGAACAGAGTC 276582 Query 69577 CACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAG 69636 || || | | ||| ||| || ||||| || ||||| || |||| || || || Sbjct 276583 CAGTCACCGTTCGCCTCAACACGCTTCATGAACAGATCCGGGGTCCACAGGGCGTAGAAC 276642 Query 69637 AGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATA 69696 ||||| | || ||| || || || || || || ||||| || ||||| | Sbjct 276643 AGATCACGGGCTCTGACCTCCTCCTTACCGTGGTTCTTACGGAGATCCAGGAACTCGAAG 276702 Query 69697 ATATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCC 69756 | ||| || ||||| || || || || || || | | || || || || || || ||| Sbjct 276703 ACATCCGAGTGCCAGGGCTCAAGGTAGATGGCGAAAGCACCGGGACGCTTGTTGCCACCC 276762 Query 69757 TGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGAT 69816 || || | ||||||||||||||| || |||| | ||||| |||| || ||| || || Sbjct 276763 TGGTCAACGTATCTGGCAGTGTTGTTGAAGACACGAAGCATAGGAACAAGACCGTTGGAG 276822 Query 69817 TTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCT 69876 |||| || || ||| ||| || || | | || || | ||||| Sbjct 276823 GTACCGTTGGTACCACCAATGTAGGAGCCAGTAGAACGGATGCGGTGCACGTTCAGACCG 276882 Query 69877 ATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCT 69936 || || || ||| | || ||||| | ||| ||| |||| ||||| || ||||| || Sbjct 276883 ATACCACCGGCCGTCTTGGAGATCATAGCGCAAGTCTTCAGAGTGTCGTAGATACCGTCA 276942 Query 69937 ATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCC 69996 ||||| || || |||||| | || || || | | || | || ||| || Sbjct 276943 ATGCTGTCCTCCTTCATGTCGACGAGGAAGCAAGAGGCAAGCTGGGGCTGGGGAGTACCA 277002 Query 69997 GCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTT 70056 || || || | || || || ||||||||||| | || | ||| | || ||||| || Sbjct 277003 GCGTTGAACAGAGTCGGGGAGGCGTGAGTGAAGTACTTCTGAGACATCAAGTTGTAGGTC 277062 Query 70057 TCAATAGCTGATTCTATATCCCACTG--ATGAATTCCTATCGCGACACGCATCAACATAT 70114 || || || |||| || | ||| ||||| || | || |||||||||| || | Sbjct 277063 TCGATGGC--CTTCTCAATGTCGCTGCCGTGAATACCAACGGCAACACGCATCAGCAGGT 277120 Query 70115 GCTGAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTT 70174 |||| || || || || || || || || ||||||||| |||| ||| | Sbjct 277121 GCTGGGGACGCTCAGCCACCTTTCCGTTGATCCGCAGCAGGTATGACCGCTCCAAAGTCT 277180 Query 70175 TAAACCCAAAATAGTTGTA--TGAAAAGTCTCTTTCGTAAATAATAACAGAATTTAGTT 70231 | || || || ||||||| ||||| || | ||||| | |||| | || || |||| Sbjct 277181 TGAAACCGAAGAAGTTGTAGTTGAAA--TCACGGTCGTATACAATAGCCGAGTTGAGTT 277237 >seq8 Length=1782630 Score = 96.9 bits (106), Expect = 5e-15 Identities = 116/158 (73%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 39608 AACATTAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAA 39667 |||| | |||||||||||| || || ||||| || | | || | ||||| || Sbjct 104514 AACAACAGGCAGGCGAAGTCGGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAG 104573 Query 39668 AATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCA 39727 || || || |||||||| ||||||||||| |||||||| || |||| ||| || || || Sbjct 104574 AAGGTCAGACCAGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAAGCGAAGGAACCG 104633 Query 39728 GAAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAG 39765 || ||||| || || || || || || || ||||| || Sbjct 104634 GAGAAGAAAATACCCTCAACGGCAGCGAAAGCAACGAG 104671 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686903055725160