Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001515345.1_202015-12-19] 669 sequences; 34,880,193 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq8 147 3e-30 seq3 147 3e-30 >seq8 Length=1782630 Score = 147 bits (162), Expect = 3e-30 Identities = 311/461 (67%), Gaps = 26/461 (6%) Strand=Plus/Plus Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787 ||||| || |||||||||||||||||||| ||||| || ||| ||| |||||| Sbjct 104238 TAGTCACCCACCCGCTTCTCGAAGAAGTTGGTCTTACCCGCCAGCGAGATCGACTCCATG 104297 Query 129788 AAATCAAATGGGTT-----CTTTG-AGTTC--CAAATTGCTG--GCACTCCAATCTGTTT 129837 || || || ||||| | ||| ||| | | |||| | | | |||| Sbjct 104298 AAGTCGAAGGGGTTGGTGGCGTTGTAGTACTTCTTGTTGCCGAGGGCCACCAAC------ 104351 Query 129838 GAGGAGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGAT 129897 || || |||| |||| |||| ||||||| ||||| || ||||||||| || | Sbjct 104352 ----AGGCGGTCCGCGACGAACTCGATGTACTGGCACATCAGCTTGGAGTTCATGCCCAG 104407 Query 129898 GAGGTTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCAC 129957 ||| ||| || || ||||| | |||| ||| ||||||| | || || || | Sbjct 104408 GAGAGCACAGGGCAGAGCGTCAGTCAGGAACTCCTGCTCAATGCCGACGGCCTCGACGAT 104467 Query 129958 GATGGCGTGAATGGTCTCCGTGCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACG-- 130015 |||| | | || || | ||| || | ||| || | | ||| || | Sbjct 104468 GATGTCCTCAACAACCTGCTTGCTGGGGCGGTTGTTCAGG---TGGGAGAACAACAGGCA 104524 Query 130016 -GCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACC 130074 || || || ||| |||||||||||||| |||||||| || || |||||| |||||| Sbjct 104525 GGCGAAGTCGGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCAGACC 104584 Query 130075 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGAT 130134 ||||||||||| |||||||| | |||||| || | | || || || |||||||| || Sbjct 104585 AGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAAGCGAAGGAACCGGAGAAGAAAAT 104644 Query 130135 CCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGG 130175 ||||| || ||||| |||| |||||||| ||| |||| Sbjct 104645 ACCCTCAACGGCAGCGAAAGCAACGAGACGCTGAGCGAAGG 104685 >seq3 Length=2393285 Score = 147 bits (162), Expect = 3e-30 Identities = 449/689 (65%), Gaps = 9/689 (1%) Strand=Plus/Plus Query 118938 TACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTA 118997 ||||| |||||| || || ||||| ||||| | | || | | || || || | Sbjct 276505 TACTTCTCGTAGAGAGCGTCGAACTCATCACCGTAGACATCAGCCAAGCCAGGGGCTTCG 276564 Query 118998 TCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGG 119057 | |||||||| |||| ||| | ||| | ||||||| ||||||||||| || || ||| Sbjct 276565 TTGGGGCAGAACAGAGTCCAGTCACCGTTCGCCTCAACACGCTTCATGAACAGATCCGGG 276624 Query 119058 ATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGC 119117 |||| || || |||| ||||| || | | || || | || || || ||| Sbjct 276625 GTCCACAGGGCGTAGAACAGATCACGGGCTCTGACCTCCTCCTTACCGTGGTTCTTACGG 276684 Query 119118 AACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCC 119177 | |||| || || | || ||||| |||||| || || ||||| | |||| | || Sbjct 276685 AGATCCAGGAACTCGAAGACATCCGAGTGCCAGGGCTCAAGGTAGATGGCGAAAGCACCG 276744 Query 119178 TTACGACGA---CCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATT 119234 ||| ||| |||||| || || || |||||| ||| || ||||||||||| Sbjct 276745 GGACGCTTGTTGCCACCCTGGTCAACGTATCTGGCAGTGTTGTTGAAGACACGAAGCATA 276804 Query 119235 GGAATGATACCATCGGATTGGCCATTTGTCCCCCGAAT--ACGAGACTTATTGGCTCTGA 119292 |||| | ||| | ||| || || || || | ||| | ||| | | | | | || Sbjct 276805 GGAACAAGACCGTTGGAGGTACCGTTGGTACCACCAATGTAGGAGCC--AGTAGAACGGA 276862 Query 119293 CATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGA 119352 ||| | || || ||| ||||| || ||| ||| ||||| ||||| | | | Sbjct 276863 TGCGGTGCACGTTCAGACCGATACCACCGGCCGTCTTGGAGATCATAGCGCAAGTCTTCA 276922 Query 119353 GACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACA 119412 || || ||||||| || || || ||| |||| | ||| ||||||||| | | Sbjct 276923 GAGTGTCGTAGATACCGTCAATGCTGTCCTCCTTCATGTCGACGAGGAAGCAAGAGGCAA 276982 Query 119413 TTTGAGGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCT- 119471 || ||| ||| |||||||||||||| ||||| || | ||||| |||| ||| | Sbjct 276983 GCTGGGGCTGGGGAGTACCAGCGTTGAACAGAGTCGGGGAGGCGTGAGTGAA-GTACTTC 277041 Query 119472 TGGGACATCTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATC 119531 || |||||| || ||||||||| | | | |||||| ||||||||||| | Sbjct 277042 TGAGACATCAAGTTGTAGGTCTCGATGGCCTTCTCAATGTCGCTGCCGTGAATACCAACG 277101 Query 119532 GAGACCCGCATAAACATGTATTGGGGTGTTTCCATCAGGATACCATCGAGCCTCTGGAGG 119591 | || ||||| | || || ||||| || || | || | || || | | ||| Sbjct 277102 GCAACACGCATCAGCAGGTGCTGGGGACGCTCAGCCACCTTTCCGTTGATCCGCAGCAGG 277161 Query 119592 TAACTCTTCTCCAAGGTCTTGAGACCAAA 119620 || | |||||| ||||||| ||| || Sbjct 277162 TATGACCGCTCCAAAGTCTTGAAACCGAA 277190 Score = 100 bits (110), Expect = 4e-16 Identities = 136/190 (72%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 118702 TAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTA 118761 |||| || || | ||||| || ||||| |||| ||||||| | || ||||||| | Sbjct 276220 TAGGCAGAGCAAGAGACGCAAGGTTACAGACAGCAACCTCATCCGGAGCACTGTACTCAA 276279 Query 118762 TAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTG 118821 |||| || ||||| | ||| || || ||||| || | |||||| || || ||| Sbjct 276280 TAATCTCGGTGCAGAGGTTGGAGCTACGGATGGTTCCGAGGTTCTTCTGGTTGCTCTTCT 276339 Query 118822 TGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAA 118881 |||| || ||||||||||| |||||| | || | || ||||| || || | || |||| Sbjct 276340 TGTTGCAAGCATCCTTGTACAGCATGAAGGGGTTACCAGTCTCGGTCTGAGCCTCCAGAA 276399 Query 118882 TAGCCTTCCA 118891 |||| | ||| Sbjct 276400 TAGCGTACCA 276409 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618430028335640