Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001515345.1_202015-12-19] 669 sequences; 34,880,193 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq8 147 3e-30 seq28 107 2e-18 seq3 82.4 9e-11 >seq8 Length=1782630 Score = 147 bits (162), Expect = 3e-30 Identities = 162/213 (76%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 94733 CAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAAAGTCG 94791 |||| || || ||| ||||| || |||||||| || |||||| | | ||| | Sbjct 104748 CAGTCCCCTGCATTGCCAAGAAGGCCGATTGGGCCATCAAGTGGATCCAGGACAGGGAAT 104689 Query 94792 CGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGT 94851 | | |||| ||| |||| ||| | || || || ||||||||||| |||||||| ||| Sbjct 104688 C-TACCTTCGCTCAGCGTCTCGTTGCTTTCGCTGCCGTTGAGGGTATTTTCTTCTCCGGT 104630 Query 94852 TCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCC 94911 |||||| | || | |||||||||||||| ||||||||||| ||||| ||||||| Sbjct 104629 TCCTTCGCTTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTGACCTTCTCC 104570 Query 94912 AACGAGCTTATCTCTCGTGACGAGGGACTCCAC 94944 |||||||| ||||||||||||||||| || ||| Sbjct 104569 AACGAGCTCATCTCTCGTGACGAGGGTCTGCAC 104537 >seq28 Length=242336 Score = 107 bits (118), Expect = 2e-18 Identities = 194/284 (68%), Gaps = 0/284 (0%) Strand=Plus/Plus Query 169169 AGACCCTTGATGTGGGAACCGTCGTTATCGGCATCCGTCATGATCATGAGACGACCATAC 169228 || ||||||||||| |||||||| ||| ||| ||||||||||| | | |||| ||| Sbjct 227164 AGGCCCTTGATGTGACTACCGTCGTGATCCTGATCAGTCATGATCATCAAATGACCGTAC 227223 Query 169229 CGAAGCTCGGAAACATCTTGATAGTCCTTACCCTGTTGAAGACCCAAGATCTTCTTGAGA 169288 ||||| || || ||| ||||| || || |||||||||| ||||||| | Sbjct 227224 CGAAGGCCGCGGGTGTCAGTATACTCCTTCTTGTGCTGCAGACCCAAGAAGTTCTTGATA 227283 Query 169289 TCGTTGAACTCTTGGTTTGATGTGAGCTGTGTGACAGAGGCATCGCGAACATTCTTACAC 169348 | | || || ||||| | || ||| || ||| ||||| || || || | Sbjct 227284 TTCTGGATTTCCTGGTTCTTCGAGATCTGGTCGAAAGAAGCATCACGGACGTTGAGCAAT 227343 Query 169349 TTCCCACGAAGAGGGAAGACACCGTAGTGATCACGACCAACGACGGAGAGACCCGCGACT 169408 || || ||||| ||||| ||||| | |||| ||||||| || | |||| || | Sbjct 227344 TTTCCTCGAAGCGGGAAAACACCAAAAAGATCCGGACCAACAACCGCTCGACCAGCCATG 227403 Query 169409 GCGAGAGTCTTCGCCGAGTCACCCTCGGTGACGATGAGCGTACA 169452 || ||| ||| ||||||||||| || || | ||| || || || Sbjct 227404 GCCAGACCCTTGGCCGAGTCACCTTCTGTCAGGATCAGGGTGCA 227447 >seq3 Length=2393285 Score = 82.4 bits (90), Expect = 9e-11 Identities = 132/190 (69%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 104886 TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACATGCTTTACAAAG 104945 ||||| | |||||||| || |||| ||||||||||||| || | |||||| ||||| | Sbjct 276411 TGTGGTACGCTATTCTGGAGGCTCAGACCGAGACTGGTAACCCCTTCATGCTGTACAAGG 276352 Query 104946 ACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCT 105005 | || || ||| | ||||| || || ||||| | || ||| || ||||| |||| Sbjct 276351 ATGCTTGCAACAAGAAGAGCAACCAGAAGAACCTCGGAACCATCCGTAGCTCCAACCTCT 276292 Query 105006 GTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAA 105065 | || || || | || | | | |||||| ||||| |||||||| || || Sbjct 276291 GCACCGAGATTATTGAGTACAGTGCTCCGGATGAGGTTGCTGTCTGTAACCTTGCGTCTC 276232 Query 105066 TCGCTCTCCC 105075 | ||||| || Sbjct 276231 TTGCTCTGCC 276222 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583255922481560