Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001515345.1_202015-12-19] 669 sequences; 34,880,193 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq4 199 1e-45 seq3 141 3e-28 seq2 91.5 4e-13 >seq4 Length=2386931 Score = 199 bits (220), Expect = 1e-45 Identities = 591/906 (65%), Gaps = 13/906 (1%) Strand=Plus/Minus Query 349197 CCGCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATC 349256 ||||| | || |||||||| || || || || || ||||| | ||| | | |||| | Sbjct 93113 CCGCTGTCGGTATCGATTTGGGAACCACCTACTCCTGTGTGGGTGTCTTCCGTGATGACC 93054 Query 349257 GTGTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTA 349316 | | ||||| ||||| || || || |||||| | || || || || | ||| || || | Sbjct 93053 GCATTGAAATCATTGCCAACGACCAGGGTAACCGCACTACCCCCTCTTTCGTGGCTTTCA 92994 Query 349317 CCGAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAA 349376 |||| || |||||| | || |||||| | || || || || | || || || | | Sbjct 92993 CCGACACCGAGCGTCTCATCGGTGATGCCGCCAAGAACCAGGTCGCCATGAACCCCCACA 92934 Query 349377 ATACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGAC----AAATCTACA 349432 | || || || ||||||||||| || || ||| | ||||| ||| | || Sbjct 92933 ACACCGTCTTCGATGCTAAGCGTCTGATCGGTCGTCGTTTTGGCGACGCTGAGGTC---- 92878 Query 349433 CAATCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATT 349492 || || || | || || | || || | ||||| | | ||| |||| || || || Sbjct 92877 CAGTCCGACATGAAGCACTGGCCCTTCAAGGTTGT-CGAGAAG--GGTGGCAAGCCCATC 92821 Query 349493 ATTGAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATG 349552 | |||||||| | || || || || || || ||||| || | || || ||| Sbjct 92820 GTCGAGGTTGAGTTCAAGGGCGAGGCCAAGCAGTTCACCCCCGAGGAGGTCTCCTCCATG 92761 Query 349553 GTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCT 349612 | | || ||| || | ||||| || || | |||| || || | | ||| Sbjct 92760 ATCCTCACCAAGATGCGTGAGACCGCTGAGGCTTACCTCGGTGGCACCGTCAACAACGCT 92701 Query 349613 GTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGC 349672 || || ||||| || ||||| || || || | |||||| || || || |||||||| Sbjct 92700 GTCATCACTGTCCCCGCCTACTTCAACGACTCTCAGCGTCAGGCCACCAAGGATGCTGGT 92641 Query 349673 AGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCA 349732 |||||| || | || ||||| | || || || || ||||| || || || ||||| Sbjct 92640 CTCATTGCCGGCCTGAACGTTCTCCGTATCATCAACGAGCCCACCGCCGCTGCCATTGCC 92581 Query 349733 TATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGT 349792 || || || || || | | || || || | || || || ||| | |||||| Sbjct 92580 TACGGTCTGGACAAGAAGGCCGAGGGTGAGCGCAACGTCCTCATCTTCGATCTTGGTGGT 92521 Query 349793 GGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACT 349852 ||||| || ||||| || || || || |||| ||||| || || || || || || || Sbjct 92520 GGTACCTTCGATGTTTCCCTCCTGACCATTGAGGAGGGTATCTTCGAGGTCAAGGCCACC 92461 Query 349853 GCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTT 349912 |||||||| || || | ||||| || || || || || || ||||| || || || Sbjct 92460 GCTGGTGACACTCACTTGGGTGGTGAGGACTTCGACAACCGCCTCGTCAACCACTTCGTC 92401 Query 349913 AAAGAATTTAAGCGTCAAGC-TAAAATTGATATTGGAGATAATCCTAGAGCAATGCGTCG 349971 || || || ||||| ||||| || | || | || || | || | ||||| Sbjct 92400 AACGAGTTCAAGCG-CAAGCACAAGAAGGACCTCACCTCCAACGCTCGTGCTCTCCGTCG 92342 Query 349972 CCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCTAT 350031 || | || || || || ||||| |||||| || | || || || |||| ||||| || Sbjct 92341 TCTCCGCACCGCTTGCGAGCGTGCCAAGCGTACCCTCTCTTCCGCTGCCCAGACCTCCAT 92282 Query 350032 TGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGGTT 350091 ||| || || ||||| || || | || |||| | || || || |||||||| || Sbjct 92281 TGAGATCGACTCTCTCTTCGAGGGTATCGACTTCTACACCTCCATCACCCGTGCTCGTTT 92222 Query 350092 TGAAGA 350097 || || Sbjct 92221 CGAGGA 92216 >seq3 Length=2393285 Score = 141 bits (156), Expect = 3e-28 Identities = 170/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || ||||| ||||| || || || || ||||| || || || Sbjct 1619298 CATACCACCACGGAGACGAAGGACAAGGTGAAGGGTCGATTCCTTCTGAATGTTGTAGTC 1619357 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || || || || ||||| || | || || ||||||||||| | ||| ||||| || || Sbjct 1619358 GGACAAGGTACGGCCATCCTCCAACTGCTTACCAGCAAAGATCAAACGCTGCTGGTCCGG 1619417 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 ||||| ||||| || || ||||| || | || || ||||| || | || || | ||| Sbjct 1619418 GGGAATGCCTTCCTTGTCTTGAATCTTGGTCTTAACGTTATCGATGGTGTCGGAAGATTC 1619477 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 |||||| | ||| | ||||| || || || ||||| || || |||||||| Sbjct 1619478 AACTTCCAATGTGATCGTCTTGCCCGTAAGAGTTTTGACGAAGATCTGCAT 1619528 Score = 138 bits (152), Expect = 3e-27 Identities = 162/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || || || |||||||| || || ||||| || || || || Sbjct 1619526 CATACCACCACGCAGACGAAGGACGAGGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTC 1619585 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 ||| | || || ||||| || || || ||||| || ||||| ||||| ||||| || || Sbjct 1619586 AGACAGGGTACGGCCATCCTCCAGCTGCTTTCCCGCGAAGATGAGACGCTGCTGGTCGGG 1619645 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 ||| || || || || |||||||| |||| || ||||| || || | ||||| | || Sbjct 1619646 AGGGATACCCTCCTTGTCCTGAATCTTAGTCTTCACATTGTCGATAGTGTCAGAAGACTC 1619705 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTAC 140725 || ||||| || | ||||||||||| || || || || Sbjct 1619706 CACCTCAAGGGTGATGGTCTTTCCGGTCAGGGTCTTGAC 1619744 Score = 116 bits (128), Expect = 1e-20 Identities = 150/207 (72%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | ||||| || || ||||||||||| || || || || || || Sbjct 1619827 CATACCACCACGCAGGCGGAGAACGAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTC 1619886 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 | | || || ||||| || || || |||||||| ||||| ||||||||||| || || Sbjct 1619887 ACTAAGGGTGCGGCCATCCTCCAGCTGCTTTCCAGCGAAGATCAGACGTTGCTGGTCGGG 1619946 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 ||| || || || |||||||| || || | || ||||| || || | ||| | || Sbjct 1619947 AGGGATGCCCTCCTTATCCTGGATCTTGGTCTTAACATTGTCGATGGTATCGCTCGACTC 1620006 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGT 140713 || || || || | ||||| ||||| Sbjct 1620007 GACCTCGAGGGTGATGGTCTTGCCGGT 1620033 >seq2 Length=2822020 Score = 91.5 bits (100), Expect = 4e-13 Identities = 82/103 (80%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 377494 ACACCAGCAAAGTGGAAAGTATTAAGAGTTAATTGAGTAGTGGGCTCACCAATTGACTGC 377553 |||||||||||||||||||| || || || | || || | ||||||||||| ||||| Sbjct 983029 ACACCAGCAAAGTGGAAAGTGTTCAGTGTCATCTGCGTGGCAGGCTCACCAATGGACTGA 983088 Query 377554 GCTGCAATAACGCCAACCATTTCTCCAGGATTGACAATAGCCT 377596 || |||| || ||||||||||| ||||| ||| || ||||| Sbjct 983089 GCAGCAAGCACACCAACCATTTCGCCAGGGTTGGCACCAGCCT 983131 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515241411902207