Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001515345.1_202015-12-19] 669 sequences; 34,880,193 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq3 194 2e-44 seq8 132 5e-26 seq1 123 3e-23 seq2 107 2e-18 >seq3 Length=2393285 Score = 194 bits (214), Expect = 2e-44 Identities = 172/215 (80%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 27418 GTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCA 27477 |||||||| || ||||| ||||| || || |||||||| ||||| ||| | || | Sbjct 1619744 GTCAAGACCCTGACCGGAAAGACCATCACCCTTGAGGTGGAGTCTTCTGACACTATCGAC 1619685 Query 27478 AATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATT 27537 ||| ||||| |||| ||||||||||||||||| || ||||| |||||||||||||| || Sbjct 1619684 AATGTGAAGACTAAGATTCAGGACAAGGAGGGTATCCCTCCCGACCAGCAGCGTCTCATC 1619625 Query 27538 TTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAA 27597 || || || ||||| || ||||||| |||||||| | ||||| || ||||||||||| Sbjct 1619624 TTCGCGGGAAAGCAGCTGGAGGATGGCCGTACCCTGTCTGACTACAACATCCAAAAGGAA 1619565 Query 27598 TCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 ||||||||||| || ||| | ||||| || ||||| Sbjct 1619564 TCCACTCTTCACCTCGTCCTTCGTCTGCGTGGTGG 1619530 Score = 152 bits (168), Expect = 6e-32 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| ||||| || ||||| |||||||| || || | || ||||| || Sbjct 1619528 ATGCAGATCTTCGTCAAAACTCTTACGGGCAAGACGATCACATTGGAAGTTGAATCTTCC 1619469 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | || | ||| | || ||||| |||||||| || ||||| || |||||| Sbjct 1619468 GACACCATCGATAACGTTAAGACCAAGATTCAAGACAAGGAAGGCATTCCCCCGGACCAG 1619409 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||| | || |||||||||||||| | ||||||| |||||| | | ||||| || Sbjct 1619408 CAGCGTTTGATCTTTGCTGGTAAGCAGTTGGAGGATGGCCGTACCTTGTCCGACTACAAC 1619349 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || |||||||| || ||||| || ||| | ||||| || ||||| Sbjct 1619348 ATTCAGAAGGAATCGACCCTTCACCTTGTCCTTCGTCTCCGTGGTGG 1619302 Score = 149 bits (164), Expect = 7e-31 Identities = 172/230 (75%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || ||||| || ||||||||||| ||||| || ||||| ||| || | Sbjct 1619300 ATGCAGATCTTCGTGAAGACTCTCACCGGCAAGACGATTACGCTGGAGGTGGAG--AGCT 1619243 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 |||| ||||| || | ||| || ||||| || |||||||| ||||| || || | Sbjct 1619242 CGGATACCATTGATAACGTCAAGAACAAGATTCAAGATAAGGAGGGCATTCCCCCGGATC 1619183 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 |||||||||| || || ||||||||||| || || |||| ||||| || | ||||| | Sbjct 1619182 AGCAGCGTCTCATCTTCGCTGGTAAGCAGCTGGAAGATGGACGTACGCTCTCCGACTACA 1619123 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 | |||| ||||| |||||| || || || | ||||| || || ||| Sbjct 1619122 ACATCCAGAAGGAGAGCACTCTGCACCTGGTGCTCCGTCTCCGTGGCGGA 1619073 Score = 138 bits (152), Expect = 1e-27 Identities = 169/230 (73%), Gaps = 3/230 (1%) Strand=Plus/Minus Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489 ||||||||||| || || || ||||| ||||| | |||| ||| | ||| | ||| | Sbjct 1620033 ACCGGCAAGACCATCACCCTCGAGGTCGAGTCGAGCGATACCATCGACAATGTTAAGACC 1619974 Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549 || || ||||| |||||||| || ||||| |||||||| ||||| || || ||||| ||| Sbjct 1619973 AAGATCCAGGATAAGGAGGGCATCCCTCCCGACCAGCAACGTCTGATCTTCGCTGGAAAG 1619914 Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609 || || ||||||| || ||||| ||||| || |||| ||||| || ||||| || Sbjct 1619913 CAGCTGGAGGATGGCCGCACCCTTAGTGACTACAACATCCAGAAGGAGTCTACTCTCCAC 1619854 Query 27610 CTAGTCTTGCGTCTTCGCGGTGG---ACAAGTTTAAAGTTTTTCCTGCAC 27656 || || | || || || ||||| || ||| || |||||||| || Sbjct 1619853 CTCGTTCTCCGCCTGCGTGGTGGTATGCAGATTTGTAGGTTTTCCTGAAC 1619804 Score = 118 bits (130), Expect = 1e-21 Identities = 398/614 (65%), Gaps = 17/614 (3%) Strand=Plus/Plus Query 81146 CGTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCACTCGTTAGGGCACATCAGGT 81205 ||||||||| |||||| | |||| | | | ||| ||||| ||||| | ||| Sbjct 276521 CGTCGAACTCATCACCGTAGACATCAGCCAAGCCAGGGGCTTCGTTGGGGCAGAACAGAG 276580 Query 81206 GCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGGGATCCAGAGGGCGGTGA 81265 |||||| || ||| ||| ||||||||| || ||| |||| |||||| || Sbjct 276581 TCCAGTCACCGTTCGCCTCAACACGCTTCATGAACAGATCCGGGGTCCACAGGGCGTAGA 276640 Query 81266 ACAGGTCGCGGCAGCGCGCCTCCTCATCACCCTGGTTGAGGCGCAACTCGAGAAAGTCCA 81325 |||| || ||| | ||||||| | ||| ||||| || | || || || || | Sbjct 276641 ACAGATCACGGGCTCTGACCTCCTCCTTACCGTGGTTCTTACGGAGATCCAGGAACTCGA 276700 Query 81326 TGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCGACCCCTTGCGACG------GC 81379 || |||| ||||| ||||| || || | ||||| | || | |||| || Sbjct 276701 AGACATCCGAGTGCCAGGGCTCAAGGTAGATGGCGAAAGCACC---GGGACGCTTGTTGC 276757 Query 81380 CACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATAGGGATGATACCAT 81439 ||||||||| ||||| | |||||| ||| || ||||| | |||||| | | ||| | Sbjct 276758 CACCCTGGTCAACGTATCTGGCAGTGTTGTTGAAGACACGAAGCATAGGAACAAGACCGT 276817 Query 81440 CTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCGCA--CCTTGCTGATTGA 81497 || |||||| ||||| | || || || | | || | | ||| || Sbjct 276818 TGGAGGTACCGTTGGTACCACCAATGTAGGAGCCAGTAGAACGGATGCGGTGCACGTT-- 276875 Query 81498 AAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGTTCATGGTCTCATAAAT 81557 |||||||| ||||| | | ||| || ||| ||| || |||| || || || || Sbjct 276876 CAGACCGATACCACCGGCCGTCTTGGAGATCATAGCGCAAGTCTTCAGAGTGTCGTAGAT 276935 Query 81558 TCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACATCTGAGGGCTTTT 81617 || || ||||| || | |||||||| | | ||| || | | ||| |||| | Sbjct 276936 ACCGTCAATGCTGTCCTCCTTCATGTCGACGAGGAAGCAAGAGGCAAGCTG-GGGC-TGG 276993 Query 81618 TGAG--CCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAACGGTTTGACATCAGG 81675 ||| || || |||||||| || |||| |||||| |||| || | ||||||| | Sbjct 276994 GGAGTACCAGCGTTGAACAGAGTCGGGGAGGCGTGAGTGAAGTACTTCTGAGACATCAAG 277053 Query 81676 TCATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGAATACCGATAGCTACACGCATA 81735 | ||||| || || | ||| ||| ||||||||||| | || |||||||| Sbjct 277054 TTGTAGGTCTCGATGGCCTTCTCAATGTCGCTGCCGTGAATACCAACGGCAACACGCATC 277113 Query 81736 AACATGTACTGGGG 81749 | || || |||||| Sbjct 277114 AGCAGGTGCTGGGG 277127 Score = 87.8 bits (96), Expect = 2e-12 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 80038 GTCCGCAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGCATAGAA 80097 || ||||| ||||||||||||||||| || ||| ||||||| ||| | |||||| Sbjct 275352 GTGCGCAGGTAGTACATGCCCGTCTTCAGACCCATCTTCCAACCGGCAAAGTGCATGCTG 275411 Query 80098 CTGAGCTTCGCAAGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTGACAGATG 80157 ||| ||| | | ||||| | || || | |||||| || ||||||||||| ||| Sbjct 275412 GTGATCTTGCCCATGGTGGGCTCCTTCAGGTGGATGTTGAGGGACTGAGACTGGTCAATG 275471 Query 80158 AAAGCCCCACGATCTGCCGCCAT 80180 || || ||||| || || ||||| Sbjct 275472 AACGCACCACGGTCCGCGGCCAT 275494 >seq8 Length=1782630 Score = 132 bits (146), Expect = 5e-26 Identities = 335/501 (67%), Gaps = 15/501 (3%) Strand=Plus/Minus Query 64663 AAAAAGGCTGAATGGGCCATCCGGTGGAT---GAATCGTGGGTCGTCGTTTGGTCAGCGT 64719 || ||||| || ||||||||| |||||| | | | | || | || | ||||||| Sbjct 104731 AAGAAGGCCGATTGGGCCATCAAGTGGATCCAGGACAGGGAATCTACCTTCGCTCAGCGT 104672 Query 64720 CTCGCAGCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTATTTTC 64779 |||| ||||| || || || || |||||||| || || || ||| ||| || ||| Sbjct 104671 CTCGTTGCTTTCGCTGCCGTTGAGGGTATTTTCTTCTCCGGTTCCTTCGCTTCCATCTTC 104612 Query 64780 TGGCTAAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCTCTCGG 64839 ||||| || ||||| || || ||||| |||||| | || || |||||||| |||||||| Sbjct 104611 TGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTGACCTTCTCCAACGAGCTCATCTCTCGT 104552 Query 64840 GACGAGGGGCTCCACCAAGAATTTGCGGTTACC--CTGTTCAGCCACCTCAAGGA-CAAA 64896 |||||||| || ||| || || || | || ||||| |||||| || | | Sbjct 104551 GACGAGGGTCTGCACACCGACTT--CGCCTGCCTGTTGTTCTCCCACCTGAACAACCGCC 104494 Query 64897 CCATCA--CATGGGACTATAATTGAT-ATAGTAAAATCGGCTGTAGAAATTGAAAAGGAA 64953 ||| || || || | | || || || | ||| || | ||||| |||| Sbjct 104493 CCAGCAAGCA-GGTTGTTGAGGACATCATCGTCGA---GGCCGTCGGCATTGAGCAGGAG 104438 Query 64954 TTCATTACTGCCGCGCTTCCGTGTCGTCTCATCGGCATGGATGCCGATAAGATGAAACAG 65013 ||| | |||| ||| || || ||| |||| | |||||| | || | |||| ||| Sbjct 104437 TTCCTGACTGACGCTCTGCCCTGTGCTCTCCTGGGCATGAACTCCAAGCTGATGTGCCAG 104378 Query 65014 TATATCGAATTTGTAGCAGATCGCCTGCTTACTCAGTTTGGTATTAAGCCCTACTGGAAT 65073 || ||||| || || || || |||||| | | || | ||| |||| || Sbjct 104377 TACATCGAGTTCGTCGCGGACCGCCTGTTGGTGGCCCTCGGCAACAAGAAGTACTACAAC 104318 Query 65074 TCTTCAAATCCATTTGACTGGATGGAGACGATCAGCCTGGAGGGGAAGACTAACTTTTTT 65133 | | || || || |||| |||||| ||||| |||| ||| ||||| ||||| || Sbjct 104317 GCCACCAACCCCTTCGACTTCATGGAGTCGATCTCGCTGGCGGGTAAGACCAACTTCTTC 104258 Query 65134 GAAAAGAGGGTAGGTGATTAC 65154 || ||| |||| ||||| ||| Sbjct 104257 GAGAAGCGGGTGGGTGACTAC 104237 >seq1 Length=3905891 Score = 123 bits (136), Expect = 3e-23 Identities = 140/185 (76%), Gaps = 2/185 (1%) Strand=Plus/Minus Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474 || |||||||| || || || ||||| ||||| || || || ||||| | || | ||| Sbjct 455610 TTCGTCAAGACCCTCACGGGTAAGACCATTACCCTCGACGTCGAGTCGAGCGACACCATC 455551 Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534 | || | ||| | || || |||||||||||||| || || || || ||||||||||| Sbjct 455550 GACAACGTCAAGACCAAGATCCAGGACAAGGAGGGTATCCCCCCGGATCAGCAGCGTCTT 455491 Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAATGTCCAAAA 27593 || || ||||||||||| || ||||||| || ||||| ||| ||||| || |||| || Sbjct 455490 ATCTTCGCTGGTAAGCAGCTTGAGGATGGCCGCACCCTGAGC-GACTACAACATCCAGAA 455432 Query 27594 GGAAT 27598 || || Sbjct 455431 GGTAT 455427 >seq2 Length=2822020 Score = 107 bits (118), Expect = 2e-18 Identities = 108/139 (78%), Gaps = 1/139 (1%) Strand=Plus/Plus Query 27494 TTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAAC 27553 ||||| |||||||||| || || || |||||||||||||| || || ||||||||||| | Sbjct 1631817 TTCAG-ACAAGGAGGGTATCCCCCCGGACCAGCAGCGTCTGATCTTCGCTGGTAAGCAGC 1631875 Query 27554 TCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAG 27613 ||||||| | ||||| || | ||||| || |||| ||||| ||||| || || || | Sbjct 1631876 TCGAGGACGGCCGTACTCTTTCGGACTACAACATCCAGAAGGAGTCCACCCTCCACCTGG 1631935 Query 27614 TCTTGCGTCTTCGCGGTGG 27632 | | || || || ||||| Sbjct 1631936 TGCTCCGCCTGCGTGGTGG 1631954 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570305630779280