Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001515345.1_202015-12-19] 669 sequences; 34,880,193 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq3 158 3e-33 seq192 109 1e-18 seq1 98.7 2e-15 seq2 91.5 4e-13 >seq3 Length=2393285 Score = 158 bits (174), Expect = 3e-33 Identities = 162/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||||||||| || || ||||| || || | ||||| |||| ||| || | ||||| Sbjct 1619317 AGGACAAGGTGAAGGGTCGATTCCTTCTGAATGTTGTAGTCGGACAAGGTACGGCCATCC 1619376 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || | |||||| ||||| ||||| | || || ||||| || ||||| |||||||||||| Sbjct 1619377 TCCAACTGCTTACCAGCAAAGATCAAACGCTGCTGGTCCGGGGGAATGCCTTCCTTGTCT 1619436 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || ||||| ||| || ||||||||||| || | ||| || || || ||||||||| Sbjct 1619437 TGAATCTTGGTCTTAACGTTATCGATGGTGTCGGAAGATTCAACTTCCAATGTGATCGTC 1619496 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 |||||||| | |||||| | ||| | ||||| Sbjct 1619497 TTGCCCGTAAGAGTTTTGACGAAGATCTGCAT 1619528 Score = 145 bits (160), Expect = 2e-29 Identities = 146/190 (77%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| ||||| ||||||||||| ||||||| ||||| || | || || | ||||| Sbjct 1619545 AGGACGAGGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGACAGGGTACGGCCATCC 1619604 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || |||||||| || || || |||||||| || ||||| |||||||| Sbjct 1619605 TCCAGCTGCTTTCCCGCGAAGATGAGACGCTGCTGGTCGGGAGGGATACCCTCCTTGTCC 1619664 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || ||||| ||||||| ||||| ||||| || | ||||| || | ||||| ||| Sbjct 1619665 TGAATCTTAGTCTTCACATTGTCGATAGTGTCAGAAGACTCCACCTCAAGGGTGATGGTC 1619724 Query 225682 TTGCCCGTCA 225691 || || |||| Sbjct 1619725 TTTCCGGTCA 1619734 Score = 131 bits (144), Expect = 4e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || ||||| |||||| || || |||| ||||| |||| | || | |||||| Sbjct 1619089 AGCACCAGGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGCGTACGTCCATCT 1619148 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| ||||||||||| || || || || || || ||||| || ||||| ||| Sbjct 1619149 TCCAGCTGCTTACCAGCGAAGATGAGACGCTGCTGATCCGGGGGAATGCCCTCCTTATCT 1619208 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || ||||| | ||| || || ||||| || ||| | ||||| || | ||| |||||| Sbjct 1619209 TGAATCTTGTTCTTGACGTTATCAATGGTATCCGAGCTCTCCACCTCCAGCGTAATCGTC 1619268 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| || | ||| || | ||| | ||||| Sbjct 1619269 TTGCCGGTGAGAGTCTTCACGAAGATCTGCAT 1619300 Score = 109 bits (120), Expect = 1e-18 Identities = 137/188 (73%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || ||||||||||| || || || |||| ||||| || | || | ||||| Sbjct 1619846 AGAACGAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCACTAAGGGTGCGGCCATCC 1619905 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| ||||||||||| || ||||| |||||||| || || || ||||| || Sbjct 1619906 TCCAGCTGCTTTCCAGCGAAGATCAGACGTTGCTGGTCGGGAGGGATGCCCTCCTTATCC 1619965 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| ||| |||||||| || | || || || | ||||| ||| Sbjct 1619966 TGGATCTTGGTCTTAACATTGTCGATGGTATCGCTCGACTCGACCTCGAGGGTGATGGTC 1620025 Query 225682 TTGCCCGT 225689 ||||| || Sbjct 1620026 TTGCCGGT 1620033 >seq192 Length=1549 Score = 109 bits (120), Expect = 1e-18 Identities = 101/127 (80%), Gaps = 1/127 (1%) Strand=Plus/Minus Query 7736 TGGTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGCTTATACAATCTT 7795 ||||||| ||||| ||||| || ||||||||||||| ||||||||||| | | | Sbjct 986 TGGTAAGGTTCTTCGCGTTGCTTCGAATTAAACCACATGCTCCACCGCTTGTGCGGGCCC 927 Query 7796 CCGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGTGGAAT-ATTTACGC 7854 |||||| || |||||||||| ||||||||||||||| | | |||| ||| | || | || Sbjct 926 CCGTCAATTCCTTTGAGTTTCAACCTTGCGGTCGTACTCCCCAGGCGGAGTGCTTAATGC 867 Query 7855 GTTAGCT 7861 ||||||| Sbjct 866 GTTAGCT 860 >seq1 Length=3905891 Score = 98.7 bits (108), Expect = 2e-15 Identities = 120/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 225526 TTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATA 225585 || |||| ||||| ||| || || | ||||| || |||||||| |||||||||||| Sbjct 455432 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGATA 455491 Query 225586 AGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCG 225645 || || || || || || || ||||| |||||||| |||||||| ||| || ||| Sbjct 455492 AGACGCTGCTGATCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCG 455551 Query 225646 ATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689 |||||||| | || ||||| | || || ||||| ||||| Sbjct 455552 ATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGT 455595 >seq2 Length=2822020 Score = 91.5 bits (100), Expect = 4e-13 Identities = 92/120 (77%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || |||||||| ||||| || || |||| ||||| || | | ||| | || || Sbjct 1631939 AGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGGCCGTCC 1631880 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| ||||||||||| || || || ||||| || || ||||| ||||||||| Sbjct 1631879 TCGAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCT 1631820 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192520978144286