Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001515345.1_202015-12-19] 669 sequences; 34,880,193 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq8 100 2e-16 seq21 93.3 3e-14 >seq8 Length=1782630 Score = 100 bits (110), Expect = 2e-16 Identities = 186/270 (69%), Gaps = 6/270 (2%) Strand=Plus/Minus Query 27456 CTGATCCACCCCCATCCCCGAGTAGTCTACCCTCATGTCCGTGTACTCTGCTCCGAAATG 27515 ||||||||| || ||| | ||| ||| | | ||| ||| || || |||||||| Sbjct 1612110 CTGATCCACACCTTGCCCGGTGTAATCTGTCTTAGCGTCGACGTATTCCGCCCCGAAATG 1612051 Query 27516 CCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCT 27575 ||||||||||| |||||||| || |||||||| || |||||| |||| || || Sbjct 1612050 TCTCCATTGGAAGCCGTACACGGGGCCCAGGTCGCCGACTTCCCGGTGCGAGAGACCGAC 1611991 Query 27576 CTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTT--TACCCCCTTCTCGGAG 27633 ||||| | | || | || |||||| |||||||||| || | ||| |||| | ||| Sbjct 1611990 TTTGTCGAGGTATTCGCGCGAGCCGTTGCCGTCCCAGATTTTGATCCCCGCTTCGCTGAG 1611931 Query 27634 AGCT-CTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTT 27692 | | | |||| | ||| || || |||||| || || || | | |||||| Sbjct 1611930 GGGTACAGAGGAGGTCGTG---CCGGAGATGAACCAGAGGAGTTCGGCGAGGACGGCGCG 1611874 Query 27693 CCAAAAGACCCTCTTGGTCGTGAGGAGGGG 27722 | ||||||| ||||| || |||||||| Sbjct 1611873 CAGGAAGACCCGTTTGGTGGTTAGGAGGGG 1611844 >seq21 Length=600870 Score = 93.3 bits (102), Expect = 3e-14 Identities = 138/187 (74%), Gaps = 8/187 (4%) Strand=Plus/Minus Query 48504 GAAGCTCGTCAAGGTGAGGCTGAGGACCCCCAGGCACCCAGAGATGGGTGACAAGTTTGC 48563 |||| |||| |||||| | ||||||| ||| | || |||| || |||||||| || Sbjct 170974 GAAGTTCGTGAAGGTGCGCATGAGGACGACCAAGATTCCCCAGATTGGAGACAAGTTCGC 170915 Query 48564 GTC-CTTCACGGCGCAAAAGGGGAC-ATGTGGAGC-CGTCCTGACCCAGGAGGACATGCC 48620 || | |||||| |||||||| || || | | | | | | | |||||| |||||||| Sbjct 170914 CTCTCGTCACGGA-CAAAAGGGTACCATCGGTATCACTTACCG--CCAGGAAGACATGCC 170858 Query 48621 CTTCGACAAGGACGGGGTGGTGCCC-GACCTCATCATCAACCCCCACGCCTTTCCCTCCA 48679 ||| ||| || ||| ||||| ||||| ||||||||||| |||||| |||||||| Sbjct 170857 TTTCACTCGGGAGGGTGTG-TGCCCTGACCTGATCATCAACCCTCACGCCATTCCCTCCC 170799 Query 48680 GGATGAC 48686 | ||||| Sbjct 170798 GTATGAC 170792 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369504187246139