Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001515345.1_202015-12-19] 669 sequences; 34,880,193 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq3 176 6e-39 >seq3 Length=2393285 Score = 176 bits (194), Expect = 6e-39 Identities = 580/897 (65%), Gaps = 6/897 (1%) Strand=Plus/Plus Query 77925 TCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGAC 77984 || || ||||| || | |||||| |||| |||||| ||| || ||||| | || | | Sbjct 276523 TCGAACTCATCACCGTAGACATCAGCCAAGCCAGGGGCTTCGTTGGGGCAGAACAGAGTC 276582 Query 77985 CAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAAT 78044 |||||||| | ||| ||| || ||||| || ||||| || |||| || || || Sbjct 276583 CAGTCACCGTTCGCCTCAACACGCTTCATGAACAGATCCGGGGTCCACAGGGCGTAGAAC 276642 Query 78045 AGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATA 78104 ||||| |||| ||| || || || || ||||| ||||| || ||||| | Sbjct 276643 AGATCACGGGCTCTGACCTCCTCCTTACCGTGGTTCTTACGGAGATCCAGGAACTCGAAG 276702 Query 78105 ATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCC 78164 | ||| || ||||| || || || || || || | | | || || || || || || ||| Sbjct 276703 ACATCCGAGTGCCAGGGCTCAAGGTAGATGGCGAAAGCACCGGGACGCTTGTTGCCACCC 276762 Query 78165 TGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGAT 78224 || || | |||||||| ||||| || | || | | ||| |||| || |||||| || Sbjct 276763 TGGTCAACGTATCTGGCAGTGTTGTTGAAGACACGAAGCATAGGAACAAGACCGTTGGAG 276822 Query 78225 GTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGATATCCCT 78284 || || || || ||| ||| || ||| | | || || | | | || Sbjct 276823 GTACCGTTGGTACCACCAATGTAGGAGCCAGTAGAACGGATGCGGTGCACGTTCAGACCG 276882 Query 78285 ATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCT 78344 || || || ||| |||| || || | ||||||| |||| || ||||||||||| || Sbjct 276883 ATACCACCGGCCGTCTTGGAGATCATAGCGCAAGTCTTCAGAGTGTCGTAGATACCGTCA 276942 Query 78345 ATACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCT 78404 || ||||| ||| |||||| | || || || | | || | || ||| || Sbjct 276943 ATGCTGTCCTCCTTCATGTCGACGAGGAAGCAAGAGGCAAGCTGGGGCTGGGGAGTACCA 277002 Query 78405 GCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTT 78464 || || || | ||||| || || || || || | || | ||| | | ||||| || Sbjct 277003 GCGTTGAACAGAGTCGGGGAGGCGTGAGTGAAGTACTTCTGAGACATCAAGTTGTAGGTC 277062 Query 78465 TCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAACATATGC 78524 || || || || ||||| | ||||| || || || |||||||||| || ||| Sbjct 277063 TCGATGGCCTTCTCAATGTCGCTGCCGTGAATACCAACGGCAACACGCATCAGCAGGTGC 277122 Query 78525 TGAGGTCTTTCAACCGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTA 78584 || || | ||| || ||| || || || || |||||| |||||||| || Sbjct 277123 TGGGGACGCTCAGCCACCTTTCCGTTGATCCGCAGCAGGTATGACCGCTCCAAAGTCTTG 277182 Query 78585 AAACCAAAATAGTTGTA--TGAAAAGTCTCTCTCGTAAATAATAACAGAATTTAGTTTAT 78642 ||||| || ||||||| ||||| || | ||||| | |||| | || || |||| | Sbjct 277183 AAACCGAAGAAGTTGTAGTTGAAA--TCACGGTCGTATACAATAGCCGAGTTGAGTTCGT 277240 Query 78643 CTTTGTATTTGGTAACAATATC-CATGACAGTAGTTGAAATAATAGGAGATCGTACACCA 78701 | | ||| ||| || || ||| | |||| || || || | | || Sbjct 277241 CGGCATGTTTCATAATTATTTCGTATGTC-TCCTTTGATATCATCGGTGCAGGAGCATTG 277299 Query 78702 TTTTTAGGATTAACATAGTTAAATAAATCTTCCATTACATCACTAAATAGtttttttGTT 78761 ||||| || || ||||||| | | |||| || || | || | || || || Sbjct 277300 TTTTTGGGGTTGACATAGTGGTAGAGATCTGAGATGACCAAAGAGAACTGCTTCTTGGTC 277359 Query 78762 TCCTTGTGTAGATTAGATACAGCTATTCTTGCAGCTAGAATAGCATAATCAGGATGT 78818 | |||||| || || || || || || | ||||| ||||| || |||||||| ||| Sbjct 277360 TGCTTGTGGAGGTTGGAAACGGCGATACGGGCAGCGAGAATGGCGTAATCAGGGTGT 277416 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694662990832160