Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001515345.1_202015-12-19] 669 sequences; 34,880,193 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq3 161 1e-34 >seq3 Length=2393285 Score = 161 bits (178), Expect = 1e-34 Identities = 472/723 (65%), Gaps = 8/723 (1%) Strand=Plus/Plus Query 76520 TCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGAC 76579 || || ||||| || | |||||| |||| ||||| ||| || || || | || | | Sbjct 276523 TCGAACTCATCACCGTAGACATCAGCCAAGCCAGGGGCTTCGTTGGGGCAGAACAGAGTC 276582 Query 76580 CACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAAT 76639 || ||||| | ||| ||| || ||||| || ||||| || |||| || || || Sbjct 276583 CAGTCACCGTTCGCCTCAACACGCTTCATGAACAGATCCGGGGTCCACAGGGCGTAGAAC 276642 Query 76640 AGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATA 76699 ||||| |||| ||| || || || || ||||| ||||| |||||||| | Sbjct 276643 AGATCACGGGCTCTGACCTCCTCCTTACCGTGGTTCTTACGGAGATCCAGGAACTCGAAG 276702 Query 76700 ATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCC 76759 | ||| || ||||| || || || || || || | | |||| || || || || || ||| Sbjct 276703 ACATCCGAGTGCCAGGGCTCAAGGTAGATGGCGAAAGCACCGGGACGCTTGTTGCCACCC 276762 Query 76760 TGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGAT 76819 || || | |||||||||||||| || | || | | ||| |||| || ||||| || Sbjct 276763 TGGTCAACGTATCTGGCAGTGTTGTTGAAGACACGAAGCATAGGAACAAGACCGTTGGAG 276822 Query 76820 GTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGATAGGCCT 76879 ||||| || || ||| ||| || ||| | ||| || | || || Sbjct 276823 GTACCGTTGGTACCACCAATGTAGGAGCCAGTAGAACGGATGCGGTGCACGTTCAGACCG 276882 Query 76880 ATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCT 76939 || || || ||| | || ||||| | ||| || |||| ||||| ||||| || || Sbjct 276883 ATACCACCGGCCGTCTTGGAGATCATAGCGCAAGTCTTCAGAGTGTCGTAGATACCGTCA 276942 Query 76940 ATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCT 76999 || || || ||| |||||| | || || || | | || | || ||| || Sbjct 276943 ATGCTGTCCTCCTTCATGTCGACGAGGAAGCAAGAGGCAAGCTGGGGCTGGGGAGTACCA 277002 Query 77000 GCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTT 77059 || || |||| || || || || |||||||| | || | ||| | | ||||| || Sbjct 277003 GCGTTGAACAGAGTCGGGGAGGCGTGAGTGAAGTACTTCTGAGACATCAAGTTGTAGGTC 277062 Query 77060 TCAATAACTGCTTCT--ATATCCCATTGATGAATTCCTACAGCGACACGCATCAACATAT 77117 || || | ||||| || || | ||||| || || || |||||||||| || | Sbjct 277063 TCGATGGC--CTTCTCAATGTCGCTGCCGTGAATACCAACGGCAACACGCATCAGCAGGT 277120 Query 77118 GCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTT 77177 |||| || || || | ||| || || || || |||||| |||||||| | Sbjct 277121 GCTGGGGACGCTCAGCCACCTTTCCGTTGATCCGCAGCAGGTATGACCGCTCCAAAGTCT 277180 Query 77178 TAAAACCAAAATAGTTGTA--TGAAAAGTCTCTTTCGTAAATAATAACCGAATTTAGTTT 77235 | ||||| || ||||||| ||||| || | ||||| | |||| |||| || |||| Sbjct 277181 TGAAACCGAAGAAGTTGTAGTTGAAA--TCACGGTCGTATACAATAGCCGAGTTGAGTTC 277238 Query 77236 GTC 77238 ||| Sbjct 277239 GTC 277241 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712928438086080