Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001515345.1_202015-12-19] 669 sequences; 34,880,193 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq3 176 9e-39 seq1 125 1e-23 seq2 111 3e-19 seq28 96.9 7e-15 seq4 84.2 5e-11 >seq3 Length=2393285 Score = 176 bits (194), Expect = 9e-39 Identities = 178/229 (78%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG- 282930 ||||||||| || ||||| || || || | || ||| || || ||||||||||| | Sbjct 1619301 ACCACCACGGAGACGAAGGACAAGGTGAAGGGTCGATTCCTTCTGAATGTTGTAGTCGGA 1619360 Query 282931 CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCG 282990 |||| || ||||||||||| | || || || |||||||||||||| || ||||| | Sbjct 1619361 CAAG-GTACGGCCATCCTCCAACTGCTTACCAGCAAAGATCAAACGCTGCTGGTCCGGGG 1619419 Query 282991 GAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050 |||| || ||||||||||| ||||| | || ||| ||||||| ||||| |||| ||| | Sbjct 1619420 GAATGCCTTCCTTGTCTTGAATCTTGGTCTTAACGTTATCGATGGTGTCGGAAGATTCAA 1619479 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 |||| | ||||||||||| ||||| | ||| || ||||| |||||||| Sbjct 1619480 CTTCCAATGTGATCGTCTTGCCCGTAAGAGTTTTGACGAAGATCTGCAT 1619528 Score = 165 bits (182), Expect = 2e-35 Identities = 169/221 (76%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||||||||| ||||| || || || | ||| ||| ||||||||||||||||||| Sbjct 1619529 ACCACCACGCAGACGAAGGACGAGGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGA 1619588 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || ||||||||||| || || || || || ||||| | ||| || ||||| || Sbjct 1619589 CAGGGTACGGCCATCCTCCAGCTGCTTTCCCGCGAAGATGAGACGCTGCTGGTCGGGAGG 1619648 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 |||||||||||||| || ||||| | || || | ||||||||||| |||| || || Sbjct 1619649 GATACCCTCCTTGTCCTGAATCTTAGTCTTCACATTGTCGATAGTGTCAGAAGACTCCAC 1619708 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATA 283092 || || ||||| ||||| || |||| ||||| |||| || Sbjct 1619709 CTCAAGGGTGATGGTCTTTCCGGTCAGGGTCTTGACGACTA 1619749 Score = 143 bits (158), Expect = 6e-29 Identities = 170/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || ||||| || || || ||||| || | ||||| || || |||||||||||||| | Sbjct 1619074 CCGCCACGGAGACGGAGCACCAGGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGAG 1619133 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 ||||| || ||||| || || || || || || ||||| | ||| || || || ||| Sbjct 1619134 AGCGTACGTCCATCTTCCAGCTGCTTACCAGCGAAGATGAGACGCTGCTGATCCGGGGGA 1619193 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCT-TCGAC 283051 || |||||||| ||||| ||||| || ||| |||| || || |||| |||| || || Sbjct 1619194 ATGCCCTCCTTATCTTGAATCTTGTTCTTGACGTTATCAATGGTATCCG-AGCTCTCCAC 1619252 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || || |||||||| || || | |||||| ||||| |||||||| Sbjct 1619253 CTCCAGCGTAATCGTCTTGCCGGTGAGAGTCTTCACGAAGATCTGCAT 1619300 Score = 134 bits (148), Expect = 3e-26 Identities = 152/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||||||||| || || || || | || || || ||||||||||||||| Sbjct 1619830 ACCACCACGCAGGCGGAGAACGAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCACT 1619889 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| |||||||||||||| || || || || || ||||||| |||||| ||||| || Sbjct 1619890 AAGGGTGCGGCCATCCTCCAGCTGCTTTCCAGCGAAGATCAGACGTTGCTGGTCGGGAGG 1619949 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || |||||||| || |||||||| | || || | ||||| || || | ||||| Sbjct 1619950 GATGCCCTCCTTATCCTGGATCTTGGTCTTAACATTGTCGATGGTATCGCTCGACTCGAC 1620009 Query 283052 TTCGAGAGTGATCGTCTTACCCGT 283075 ||||| ||||| ||||| || || Sbjct 1620010 CTCGAGGGTGATGGTCTTGCCGGT 1620033 >seq1 Length=3905891 Score = 125 bits (138), Expect = 1e-23 Identities = 135/179 (75%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971 || |||||||||||||| || |||||||||||||| || || || || || ||||| Sbjct 455432 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGATA 455491 Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCG 283031 | ||| || || || || |||||||||||||| |||||||| | || ||| | ||| Sbjct 455492 AGACGCTGCTGATCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCG 455551 Query 283032 ATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090 || ||||| | ||||| ||||| || || ||||||||||| | ||||| ||||| Sbjct 455552 ATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTGAGGGTCTTGACGAA 455610 >seq2 Length=2822020 Score = 111 bits (122), Expect = 3e-19 Identities = 106/136 (78%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||||||||| || ||||| || | ||| || || |||||||||||||| | Sbjct 1631955 ACCACCACGCAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGA 1631896 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| || ||||| ||||| || || || || || ||||||| ||| || ||||| || Sbjct 1631895 AAGAGTACGGCCGTCCTCGAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCCGGGGG 1631836 Query 282992 AATACCCTCCTTGTCT 283007 ||||||||||||||| Sbjct 1631835 GATACCCTCCTTGTCT 1631820 >seq28 Length=242336 Score = 96.9 bits (106), Expect = 7e-15 Identities = 202/291 (69%), Gaps = 10/291 (3%) Strand=Plus/Plus Query 274430 CACGATGGGCGTGATAAATTTCTTCAGGAAACCTGGAATTTCTAGCAGACTGGGGAAACA 274489 ||| ||||| ||||| |||| ||| ||| | ||||| | |||| ||| || || Sbjct 227082 CACAATGGGAGTGATGAATTCAATCAAGAATTCGGGAATCTTCAGCAAACTAGGAAACTG 227141 Query 274490 ACTATGGAAAAAGTTCATGACAAGACCTGATATGTGAGTTCCGTCAACGTCGGCATCTGT 274549 || | ||||| |||| || || |||||| | ||||| || ||| || Sbjct 227142 GGCCTGTAGGAAGTTGATGAGCAGGCCCTTGATGTGACTACCGTCGTGATCCTGATCAGT 227201 Query 274550 CATGATCATAACATGTCCATACCGAAG--CGAGGAAGTATCTTTATACAACTTCCCTGTT 274607 ||||||||| | ||| || |||||||| || || || || ||||| |||| ||| Sbjct 227202 CATGATCATCAAATGACCGTACCGAAGGCCGCGG--GTGTCAGTATACTCCTTCT-TGTG 227258 Query 274608 -TGAAG-CCCAAGAATTTGCTTGAGAGCGGTGATTTCTTCGTTCTTTGTGATACTCGCC- 274664 || || |||||||| || ||||| | |||||| | |||||| | ||| || | | Sbjct 227259 CTGCAGACCCAAGAAGTT-CTTGATATTCTGGATTTCCTGGTTCTTCGAGAT-CTGGTCG 227316 Query 274665 ACAGAAGCATCACGTACGTTCAGCAACTTACCGCGGAGAGGGAAAACGCCA 274715 | |||||||||||| ||||| ||||| || || || || |||||||| ||| Sbjct 227317 AAAGAAGCATCACGGACGTTGAGCAATTTTCCTCGAAGCGGGAAAACACCA 227367 >seq4 Length=2386931 Score = 84.2 bits (92), Expect = 5e-11 Identities = 121/168 (72%), Gaps = 2/168 (1%) Strand=Plus/Plus Query 315667 ACCCCACCTCCGAAATTCTTAAGCGCCTCTGCCATGGCACCGAGACTCTCGCGGTCCACA 315726 || ||||| |||| |||| || |||| | || ||||||||| || ||||||| Sbjct 1880036 ACACCACCCTCGAAGCTCTTCAGAGCCTTGGACAGAGCACCGAGAGAGTCACGGTCCAGG 1880095 Query 315727 AAGTTGGTCGGCTCATCAAGAACGATGACGTGGGGTTGTTGCCATAGAGC-GGCGCCGAT 315785 |||| || ||||| || |||||||||||||| || | ||||| ||||| |||| | | Sbjct 1880096 TAGTTAGTAGGCTCGTCCAGAACGATGACGTGAGGACGCTGCCA-AGAGCAGGCGGCAAG 1880154 Query 315786 AACGAGCTTTAGTTTTTGCCCACCAGACAGTCCACGGATGCGAGAATG 315833 |||| ||| | || ||||| ||||| || || ||||| || || Sbjct 1880155 GACGACCTTGACACGCTGACCACCGGACAGACCGCGCATGCGGGAGTG 1880202 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046730227809526