Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001515345.1_202015-12-19] 669 sequences; 34,880,193 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq3 154 1e-32 seq1 102 6e-17 >seq3 Length=2393285 Score = 154 bits (170), Expect = 1e-32 Identities = 160/210 (76%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||||||||| || ||||||||||| ||||||||||| |||| ||| || | || || Sbjct 1619091 CACCAGGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGCGTACGTCCATCTTC 1619150 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 ||||||||| || || ||||| | |||||||||||| | || | || ||||| || Sbjct 1619151 CAGCTGCTTACCAGCGAAGATGAGACGCTGCTGATCCGGGGGAATGCCCTCCTTATCTTG 1619210 Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| | ||| | | | ||||| || | | |||||||||| |||||||||||| Sbjct 1619211 AATCTTGTTCTTGACGTTATCAATGGTATCCGAGCTCTCCACCTCCAGCGTAATCGTCTT 1619270 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||||| |||||||||||||| ||||| Sbjct 1619271 GCCGGTGAGAGTCTTCACGAAGATCTGCAT 1619300 Score = 123 bits (136), Expect = 2e-23 Identities = 157/211 (74%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG-CGAGTTGGCGCTCGTCGTC 44187 || |||||||| || ||||| || |||||||| |||| | || | || | || || Sbjct 1619320 ACAAGGTGAAGGGTCGATTCCTTCTGAATGTTGTAGTCGGACAAGGTACGGC-CATCCTC 1619378 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 || |||||| || |||||||||||||||||||| || | || | |||||||| || Sbjct 1619379 CAACTGCTTACCAGCAAAGATCAAACGCTGCTGGTCCGGGGGAATGCCTTCCTTGTCTTG 1619438 Query 44248 TATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 ||||| ||| || ||| | |||||||||| ||||| || |||| || ||||||| Sbjct 1619439 AATCTTGGTCTT-AACGTTATCGATGGTGTCGGAAGATTCAACTTCCAATGTGATCGTCT 1619497 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | ||||| || || || |||||||| ||||| Sbjct 1619498 TGCCCGTAAGAGTTTTGACGAAGATCTGCAT 1619528 Score = 116 bits (128), Expect = 3e-21 Identities = 145/199 (73%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || |||||||| ||| ||||||||||||||||| || | || || | || ||| Sbjct 1619548 ACGAGGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGACAGGGTACGGCCATCCTCC 1619607 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| || || ||||| | ||||||||| || | ||| | ||| ||||| ||| Sbjct 1619608 AGCTGCTTTCCCGCGAAGATGAGACGCTGCTGGTCGGGAGGGATACCCTCCTTGTCCTGA 1619667 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||||| | | || ||||| | || |||||||| | || || |||||| Sbjct 1619668 ATCTTAGTCTTCACATTGTCGATAGTGTCAGAAGACTCCACCTCAAGGGTGATGGTCTTT 1619727 Query 44309 CCCGTGAGGGTCTTCACGA 44327 || || |||||||| |||| Sbjct 1619728 CCGGTCAGGGTCTTGACGA 1619746 >seq1 Length=3905891 Score = 102 bits (112), Expect = 6e-17 Identities = 131/181 (72%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 44148 CCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGA 44207 |||| ||||||||||| ||| || ||| | || || |||||||| || || |||| Sbjct 455430 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGA 455489 Query 44208 TCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC 44267 | | |||||||||||| | || | ||| ||||| ||| ||||| ||| | | Sbjct 455490 TAAGACGCTGCTGATCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGT 455549 Query 44268 CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGA 44327 | ||||||||| || || || || | ||||| ||||| |||||||||||||| |||| Sbjct 455550 CGATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTGAGGGTCTTGACGA 455609 Query 44328 A 44328 | Sbjct 455610 A 455610 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359987464840773