Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001715265.1_202016-08-29] 310 sequences; 36,172,237 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq240 132 6e-26 >seq240 Length=565334 Score = 132 bits (146), Expect = 6e-26 Identities = 194/271 (72%), Gaps = 4/271 (1%) Strand=Plus/Plus Query 145998 CTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGCCCCGAAGTG 146057 ||| || || ||||| || |||||| ||||||| ||| || || | |||||||| || Sbjct 187923 CTGATCGACACCCTGACCAGAGTAATCCGTCTTGGCGTCGACATATTCCGCCCCGAAATG 187982 Query 146058 CCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCCCAGCCCGGC 146117 ||||||||||| ||||| ||||| || ||||| ||| || | |||| || ||| | Sbjct 187983 TCTCCACTGGAAGCCGTACACGGGACCGAGGTCGCCGACTTCGCGGTGCGAAAGACCGAC 188042 Query 146118 CCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCC--CCTCGCGGAG 146175 | ||||| | || ||||| || ||| | |||||||| |||| || | |||| ||| Sbjct 188043 TTTGTCGAGGTATTCGCGGGAGCCATTGCCATCCCAGATTTTGATCCCGGCTTCGCTGAG 188102 Query 146176 AGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCCTC 146235 | || |||| || | || |||||||||||| || || ||||||| | | | Sbjct 188103 -GGGCA-GGGAGGAGGTCGTGCCGGAGATGAACCAGAGGAGTTCGGCGAGGACGGCGCGC 188160 Query 146236 CAGAAGACCCTCTTGGTGGTCAGCAGGGGGA 146266 |||||| | ||||||||| || ||||||| Sbjct 188161 AGGAAGACGCGCTTGGTGGTGAGGAGGGGGA 188191 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590074513452400