Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001715265.1_202016-08-29] 310 sequences; 36,172,237 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq259 197 1e-45 seq45 132 5e-26 seq2 127 2e-24 seq237 98.7 1e-15 seq216 86.0 6e-12 >seq259 Length=165088 Score = 197 bits (218), Expect = 1e-45 Identities = 215/285 (75%), Gaps = 3/285 (1%) Strand=Plus/Minus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| ||||||||||| || |||||||||| |||||| | || ||| Sbjct 128487 ATCTGGCAGATGTACAAGAAGGCCGAGGCTTCTTTCTGGACCGCCGAGGAAATCGATCTG 128428 Query 116696 TCCAAGGACACGAGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752 |||||||| | ||||||| | ||| |||||||| |||||||| | |||||| Sbjct 128427 TCCAAGGATTTGCACGACTGGCACAACCGCCTGAACGACGACGAGCGCTACTTCATCTCC 128368 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 ||||| || || || ||||| ||| ||| ||||| ||||||||||| || |||||||| Sbjct 128367 CACGTTCTCGCGTTCTTCGCTGCCTCCGATGGCATTGTCAACGAGAACCTTGTCGAGCGC 128308 Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATG 116872 ||| ||||| ||||| | ||||| || ||||||||||| || |||||| ||| Sbjct 128307 TTCAGCGGCGAGGTCCAGGTTCCTGAGGCTCGTTGCTTCTACGGATTCCAGATCATGATG 128248 Query 116873 GAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTAC 116917 |||||| | ||||| || | || || ||| ||||| || ||| Sbjct 128247 GAGAACATCCACTCCGAGACCTACTCTCTCCTGATCGATACCTAC 128203 Score = 188 bits (208), Expect = 7e-43 Identities = 304/437 (70%), Gaps = 0/437 (0%) Strand=Plus/Minus Query 116982 AGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCC 117041 |||||||||| ||||| | |||||| | ||| ||| | |||||| |||| | Sbjct 128085 AGAAGGCCGATTGGGCCATTAAGTGGATCCAGGACAGGGAGTCGACCTTCGCTCAGCGTC 128026 Query 117042 TGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTT 117101 | || || ||||| ||||| ||||| ||||||| || ||| ||||| |||| || | Sbjct 128025 TCGTTGCTTTCGCTGCCGTTGAGGGTATCTTCTTCTCCGGCTCCTTCGCTTCCATCTTCT 127966 Query 117102 GGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGG 117161 |||||||||| || || |||||||| || || || ||| ||||||||||||||| | | Sbjct 127965 GGCTCAAGAAGCGTGGTCTCATGCCTGGTCTCACCTTCTCCAACGAGCTCATCTCTCGTG 127906 Query 117162 ACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGA 117221 ||||||||||||| |||||| || || |||||||| || || | || || | Sbjct 127905 ACGAGGGTCTGCACACCGACTTCGCTTGCCTGCTGTTCTCCCACCTGAACAACCGCCCCA 127846 Query 117222 GCGCGGCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCA 117281 || | || || || || ||| || |||| ||| |||||| ||||| | Sbjct 127845 GCAAACAGGTTGTTGAAGACATTATCGTCGAGGCCGTCGGCATTGAGCAGGAGTTCCTGA 127786 Query 117282 CCGAAGCGCTGCCGGTGCGTCTGCTGGGACTCAATTGCGAAACGATGTCGCAATACATCG 117341 | || || ||||| || ||||||||| | || | | | ||||| || ||||||| Sbjct 127785 CTGACGCTCTGCCCGTTGCTCTGCTGGGCATGAACTCCAAGCTGATGTGTCAGTACATCG 127726 Query 117342 AGTTCGTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGCCCA 117401 |||| ||||| ||| | |||||| | | || | | | ||| |||||||| | ||| Sbjct 127725 AGTTTGTCGCGGACCGCCTGCTGGTGGCCCTCGGCAACAAGAAGTACTACAACGCCACCA 127666 Query 117402 ACCCGCTGGACTTTATG 117418 |||| | ||||| ||| Sbjct 127665 ACCCCTTCGACTTCATG 127649 >seq45 Length=445819 Score = 132 bits (146), Expect = 5e-26 Identities = 140/182 (77%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758 ||||| || || |||||||| || ||||| ||| |||||||||| | | ||||| | | Sbjct 202348 TTCGTCAAGACCCTCACGGGTAAGACCATTACCCTCGACGTCGAGTCGAGCGACACCATC 202407 Query 40759 CA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACT 40817 | |||| ||||| || || | ||||| ||||| |||||| |||| ||||| || || Sbjct 202408 GACAACG-TCAAGACCAAGATCCAGGACAAGGAGGGTATCCCCCCGGATCAGCAGCGTCT 202466 Query 40818 CATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAA 40877 |||| ||| || || ||||| || || | |||||||| | |||||||||||||||||| Sbjct 202467 TATCTTCGCTGGTAAGCAGCTTGAGGATGGCCGCACCCTGAGCGACTACAACATCCAGAA 202526 Query 40878 GG 40879 || Sbjct 202527 GG 202528 >seq2 Length=1425683 Score = 127 bits (140), Expect = 2e-24 Identities = 152/204 (75%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 40714 ACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA-AACGCTCAAGGA 40772 || ||||| ||||||||| |||| ||||| ||| ||| | | | | |||| ||||| Sbjct 869095 ACCGGCAAGACCATCACCCTCGAGGTCGAGTCCAGCGATACCATCGACAACG-TCAAGAC 869153 Query 40773 AAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAA 40832 || || | || || ||||||||||| | |||||||| || || |||| |||||| || Sbjct 869154 CAAGATCCAGGATAAGGAGGGCATCCCTCCCGACCAGCAGCGTCTGATCTTCGCGGGAAA 869213 Query 40833 ACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCA 40892 |||||||| || | ||||| || | ||||||||||||||||||||| | || || || Sbjct 869214 GCAGCTGGAGGATGGCCGCACGCTTAGTGACTACAACATCCAGAAGGAGTCTACTCTCCA 869273 Query 40893 TCTAGTGTTGCGCTTGAGGGGCGG 40916 ||| || | ||| || | || || Sbjct 869274 TCTTGTCCTCCGCCTGCGTGGTGG 869297 Score = 120 bits (132), Expect = 3e-22 Identities = 154/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || |||||||| || || ||||| | || || ||| | || Sbjct 869600 ATGCAGATCTTCGTCAAGACTCTCACGGGAAAGACGATCACATTGGAAGTTGAATCTTCC 869659 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| | ||| || |||| ||||| || ||||||||| ||||||| Sbjct 869660 GACACAATTGATAACGTT-AAGACCAAGATTCAAGACAAGGAAGGCATCCCCCCGGACCA 869718 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||||| ||| || || ||| |||| || | || ||| | ||||||||| Sbjct 869719 GCAGCGTCTCATCTTCGCTGGTAAGCAGTTGGAGGATGGCCGTACCTTGTCCGACTACAA 869778 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||||| || |||| || || || || Sbjct 869779 CATCCAGAAAGAATCCACTCTTCACCTTGT 869808 Score = 113 bits (124), Expect = 5e-20 Identities = 153/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || || ||||| || || || | || || || | | Sbjct 869828 ATGCAGATCTTCGTGAAGACTCTTACCGGCAAGACGATTACGCTGGAGGTGGAGAGCTCG 869887 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | | | |||| ||||| || |||| || || |||||||| ||| ||||||| Sbjct 869888 GATACCATTGATAACG-TCAAGACTAAGATTCAAGATAAGGAGGGCATTCCCCCGGACCA 869946 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||||| ||| || || ||| |||| || | || || ||| ||| ||||| Sbjct 869947 GCAGCGTCTCATCTTCGCTGGTAAGCAGTTGGAAGATGGACGTACGCTCTCCGATTACAA 870006 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 ||||||||||||| ||| ||||| || ||| Sbjct 870007 CATCCAGAAGGAGAGCACTCTGCACCTGGTG 870037 Score = 98.7 bits (108), Expect = 1e-15 Identities = 143/202 (71%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 40697 TATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCG 40756 || |||| || || || || || || ||||||||| | || || || | | |||| | Sbjct 869379 TAGTCGTCAAGACCCTGACCGGAAAGACCATCACCCTTGAGGTGGAGTCTTCTGACACCA 869438 Query 40757 TGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGAC 40816 | | | | ||| || |||| ||||| |||||||| ||| |||||||||| || | Sbjct 869439 TCGACAATGTGAAGACCAAGATTCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGTC 869498 Query 40817 TCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGA 40876 | |||| ||| || || |||||||| || | || ||||| ||||||||||| || | Sbjct 869499 TGATCTTCGCTGGAAAGCAGCTGGAGGATGGCCGTACCCTGTCTGACTACAACATTCAAA 869558 Query 40877 AGGAGGCCACGCTGCATCTAGT 40898 |||| |||| || || || || Sbjct 869559 AGGAATCCACCCTTCACCTCGT 869580 >seq237 Length=1094385 Score = 98.7 bits (108), Expect = 1e-15 Identities = 104/137 (76%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842 ||||| ||||| |||||| |||||||||| || || |||| ||| || || ||||| || Sbjct 4318 GACAAGGAGGGTATCCCCCCGGACCAGCAGCGTCTGATCTTCGCTGGTAAGCAGCTCGAG 4259 Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902 |||| || || || ||||||||||||||||||||| |||| || || | ||| | Sbjct 4258 GACGGCCGTACTCTTTCGGACTACAACATCCAGAAGGAGTCCACCCTCCACTTGGTGCTC 4199 Query 40903 CGCTTGAGGGGCGGCGG 40919 ||| || | || || || Sbjct 4198 CGCCTGCGTGGTGGTGG 4182 >seq216 Length=569298 Score = 86.0 bits (94), Expect = 6e-12 Identities = 102/136 (75%), Gaps = 2/136 (1%) Strand=Plus/Minus Query 139382 GGCTTCCACGTGCACGAGTTCGGCGACGCGAGCAACGGGTGCACGTCGGCCGGCGAGCAC 139441 ||||||||||| ||| ||||||| ||| | |||||| ||||| || || ||| ||| Sbjct 456352 GGCTTCCACGTCCACCAGTTCGGTGACAACACCAACGGCTGCACCTCCGCTGGCCCTCAC 456293 Query 139442 TTCAACCCCGCGCGCCGGGACCACGGCGCGCCCGACGCCGA-GATCAGGCACGTCGGCGA 139500 ||||||||| || | |||||| || ||||| | ||| || | | |||||||| || Sbjct 456292 TTCAACCCCTTCGGCAAGACCCACGGTGCTCCCGAGGACGACGAGC-GTCACGTCGGTGA 456234 Query 139501 CCTGGGCAACCTCGAG 139516 ||| |||||| || || Sbjct 456233 CCTTGGCAACTTCAAG 456218 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515217203525600