Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001715265.1_202016-08-29] 310 sequences; 36,172,237 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq259 158 2e-33 >seq259 Length=165088 Score = 158 bits (174), Expect = 2e-33 Identities = 296/433 (68%), Gaps = 29/433 (7%) Strand=Plus/Minus Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977 ||||| || ||||| ||||| || |||||||| || | ||||| ||||| |||||| Sbjct 128023 GTTGCTTTCGCTGCCGTTGAGGGTATCTTCTTCTCCGGCTCCTTCGCTTCCATCTTCTGG 127964 Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037 ||||||| | ||| | ||||||||||||||| |||||| ||| |||| ||| | ||| Sbjct 127963 CTCAAGAAGCGTGGTCTCATGCCTGGTCTCACCTTCTCCAACGAGCTCATCTCTCGTGAC 127904 Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCTGT---------TGAAAAAGGGTTTTGTT 102088 || ||||| || |||||| || ||| |||||| |||| || | Sbjct 127903 GAGGGTCTGCACACCGACTTCGCTTGCCTGCTGTTCTCCCACCTGAACAACCG------- 127851 Query 102089 GATACCCCATCAAGAGAAAGGATTCTTGAA---ATTGTCACTGAAGCCGTCCGAATTGAA 102145 ||||| ||| | ||| || ||||| ||| || || |||||| | ||||| Sbjct 127850 ----CCCCAGCAA---ACAGG-TTGTTGAAGACATTATCGTCGAGGCCGTCGGCATTGAG 127799 Query 102146 CAAGAATTTCTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATG 102205 || || || || || | | ||||| ||| | |||| ||||||| |||| ||||| Sbjct 127798 CAGGAGTTCCTGACTGACGCTCTGCCCGTTGCTCTGCTGGGCATGAACTCCAAGCTGATG 127739 Query 102206 AGCCAGTACATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGGACTAGAA-AAGCA 102264 | |||||||| || ||||| || || || |||| | | || | | || ||| | Sbjct 127738 TGTCAGTACATCGAGTTTGTCGCGGACCGCCTGCTGGTGGCCCTCGG-CAACAAGAAGTA 127680 Query 102265 CTATAATGTTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAA 102324 ||| || | |||||||||||| |||||||| || || || | | ||||||||| Sbjct 127679 CTACAACGCCACCAACCCCTTCGACTTCATGGAGTCGATCTCGCTGGCGGGTAAGACCAA 127620 Query 102325 CTTTTTTGAAAAG 102337 ||| || || ||| Sbjct 127619 CTTCTTCGAGAAG 127607 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989580069496050