Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20niger_20[genbank_20GCA_5F001715265.1_202016-08-29]
310 sequences; 36,172,237 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq259 150 3e-31
>seq259
Length=165088
Score = 150 bits (166), Expect = 3e-31
Identities = 334/494 (68%), Gaps = 19/494 (4%)
Strand=Plus/Minus
Query 125367 AAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGA 125426
|| ||||| | |||| ||| ||||||| | ||| |||| | | ||| | |
Sbjct 128086 AAGAAGGCCGATTGGGCCATTAAGTGGATCCAGGACAGGGAGTCGACCTTCGCTCAGCGT 128027
Query 125427 CTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTT 125486
|| || || ||||| ||||| ||||| |||||||| || || || || |||||||
Sbjct 128026 CTCGTTGCTTTCGCTGCCGTTGAGGGTATCTTCTTCTCCGGCTCCTTCGCTTCCATCTTC 127967
Query 125487 TGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGA 125546
|||||||||||||| || |||||||| || || || | |||||| | || |||||
Sbjct 127966 TGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTCACCTTCTCCAACGAGCTCATCTCTCGT 127907
Query 125547 GACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTT-TCGCAACT-ATCTGCGTCCCG 125604
|||||||| || ||| ||||| || || ||||| || || || | | | |||
Sbjct 127906 GACGAGGGTCTGCACACCGACTTCGCTTGCCTGCTGTTCTCCCACCTGAACAACCGCCCC 127847
Query 125605 AGTGCAGATCCAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAAC 125664
| ||| | ||| | || | | ||||| | ||| ||||| | || || |
Sbjct 127846 A--GCAAA--CAG-GTTGTTGAAG------ACATTATCGTCGAGGCCGTCGGCATTGAGC 127798
Query 125665 AAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCTAATGT 125724
| ||||| || || || | || || || || | |||||||||| |||||| ||||
Sbjct 127797 AGGAGTTCCTGACTGACGCTCTGCCCGTTGCTCTGCTGGGCATGAACTCCAAGCTGATGT 127738
Query 125725 GCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGCCGCAAGA--- 125781
| ||||||| |||||||| || || || || ||| | | | ||| |||||
Sbjct 127737 GTCAGTACATCGAGTTTGTCGCGGACCGCCTGCTG---GTGGCCCTCGGCAACAAGAAGT 127681
Query 125782 TTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCA 125841
|||||||||| || ||||| || |||||| || || || | |||||||||||
Sbjct 127680 ACTACAACGCCACCAACCCCTTCGACTTCATGGAGTCGATCTCGCTGGCGGGTAAGACCA 127621
Query 125842 ACTTTTTCGAGAAG 125855
|||| |||||||||
Sbjct 127620 ACTTCTTCGAGAAG 127607
Score = 131 bits (144), Expect = 2e-25
Identities = 208/291 (71%), Gaps = 8/291 (3%)
Strand=Plus/Minus
Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078
|| ||| | |||||||| ||||| |||| || || ||||| | ||| || ||||||||
Sbjct 128487 ATCTGGCAGATGTACAAGAAGGCCGAGGCTTCTTTCTGGACCGCCGAGGAAATCGATCTG 128428
Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138
|||||||| || |||| ||| | | || ||| || ||||| | || || ||
Sbjct 128427 TCCAAGGATTTGCACGACTGGCACAACCGCCTGAACGACGACGAGCGCTACTTCATCTCC 128368
Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATC-TGTTGACACG 125197
||| || | || ||||| || | ||||||||| || |||||||| || | ||| || ||
Sbjct 128367 CACGTTCTCGCGTTCTTCGCTGCCTCCGATGGCATTGTCAACGAGAACCTTGTCGA-GCG 128309
Query 125198 ATTCTCTCAAGAGTTGACCA--TTCCAGAGGTGTCG-TGCTTTTACGGATTCCAAATCAT 125254
||| ||| | ||| |||| |||| ||| ||||| ||||||||||| |||||
Sbjct 128308 CTTCAGCGGCGAG--GTCCAGGTTCCTGAGG-CTCGTTGCTTCTACGGATTCCAGATCAT 128252
Query 125255 GATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACAT 125305
||| |||||| | ||||| || | |||||| ||||| || | |||||
Sbjct 128251 GATGGAGAACATCCACTCCGAGACCTACTCTCTCCTGATCGATACCTACAT 128201
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741056328395600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |