Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001715265.1_202016-08-29] 310 sequences; 36,172,237 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq259 89.7 4e-13 >seq259 Length=165088 Score = 89.7 bits (98), Expect = 4e-13 Identities = 157/226 (69%), Gaps = 2/226 (1%) Strand=Plus/Plus Query 104592 GTATTCGCCTACTCGTTTTTCaaaaaaaTTAGTCTTGCCCTCCAGAGAAATATTATTCAT 104651 ||| || ||||| || || || || || || ||||| ||| |||| || || | ||| Sbjct 127592 GTAGTCTCCTACCCGCTTCTCGAAGAAGTTGGTCTTACCCGCCAGCGAGATCGACTCCAT 127651 Query 104652 AAATTCGAAAGGATTCAAAGTCTTAAAATATTTTTCGTAGCCAAGCTCGATCAACAGTCG 104711 || ||||| || || | || | || || | || ||| || | | || ||| || Sbjct 127652 GAAGTCGAAGGGGTTGGTGGCGTTGTAGTACTTCTTGTTGCCGAGGGCCACCAGCAGGCG 127711 Query 104712 ATCCGCCACAAATTCGATGTACTCGCACAT-AGAATGTGCATTCATGCCCAGCATTGCGA 104770 ||||| ||||| |||||||||| ||||| || || | ||||||||||||| || | Sbjct 127712 GTCCGCGACAAACTCGATGTACTGACACATCAGCTTG-GAGTTCATGCCCAGCAGAGCAA 127770 Query 104771 CGGGTAAAGCGTTAGTaaaaaaaTCTTTCTCGATGTCCACGGCTTC 104816 |||| | ||||| ||| | || || | ||| ||| | ||||| || Sbjct 127771 CGGGCAGAGCGTCAGTCAGGAACTCCTGCTCAATGCCGACGGCCTC 127816 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429934375648050