Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001715265.1_202016-08-29] 310 sequences; 36,172,237 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq259 152 5e-32 seq2 122 8e-23 seq237 98.7 9e-16 >seq259 Length=165088 Score = 152 bits (168), Expect = 5e-32 Identities = 340/504 (67%), Gaps = 15/504 (3%) Strand=Plus/Minus Query 46098 CAAGAAAACCGACTGGGCGATGAAGTGGATCAACAGCAGCACCGCGACTTTCGCCGAGCG 46157 |||||| |||| ||||| || ||||||||| | ||| |||| ||||| |||| Sbjct 128087 CAAGAAGGCCGATTGGGCCATTAAGTGGATCCAGGACAGGGAGTCGACCTTCGCTCAGCG 128028 Query 46158 TATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGTTTTGCCGCCATCTT 46217 | | || || || || || ||||| |||| || || ||| || || ||||||| Sbjct 128027 TCTCGTTGCTTTCGCTGCCGTTGAGGGTATCTTCTTCTCCGGCTCCTTCGCTTCCATCTT 127968 Query 46218 TTACATCAA-AACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAACGAGCTGATATCGC 46276 | |||| || | || | ||||||| || || || || ||||||||| || || | Sbjct 127967 CTGGCTCAAGAAGCGTGGTC-TCATGCCTGGTCTCACCTTCTCCAACGAGCTCATCTCTC 127909 Query 46277 GCGACGAGGGCCTGCATACGGACTTTGCGTGTCTCTACTATAACACTCGCGTGCACGACA 46336 | |||||||| ||||| || ||||| || || || || | | | | | || || || Sbjct 127908 GTGACGAGGGTCTGCACACCGACTTCGCTTGCCTG--CTGTT-CTCCCACCTGAACAACC 127852 Query 46337 AGCTTGCGCCCG---ACACCGTGCTGAG--CATGTTCAAGGAGGCGGTGGCCATTGAGAA 46391 || || | ||| || ||| ||| || ||||| || | ||||||| | Sbjct 127851 -----GCCCCAGCAAACAGGTTGTTGAAGACATTATCGTCGAGGCCGTCGGCATTGAGCA 127797 Query 46392 GGAGTTTTTTACGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAACGCACAGTCAATGTG 46451 |||||| | || | ||| ||||||| ||| ||||||||||||||| | || ||||| Sbjct 127796 GGAGTTCCTGACTGACGCTCTGCCCGTTGCTCTGCTGGGCATGAACTCCAAGCTGATGTG 127737 Query 46452 CGACTACATCGAGTTTGTAGCGGACCGACTGCTCGTGCAGCTTCACCAGCCGAAGCATTT 46511 | |||||||||||||| |||||||| ||||| ||| || | | |||| | | Sbjct 127736 TCAGTACATCGAGTTTGTCGCGGACCGCCTGCTGGTGGCCCTCGGCAACAAGAAGTACTA 127677 Query 46512 TCACGCGCGCAATCCATTTGAGTTTATGAACAACATCTCCCTGGAGGGCAAAACTAATTT 46571 |||| ||| || || || || ||| | ||||| |||| ||| || || || || Sbjct 127676 CAACGCCACCAACCCCTTCGACTTCATGGAGTCGATCTCGCTGGCGGGTAAGACCAACTT 127617 Query 46572 TTTCGAAAAGCGCGTCGGCGAGTA 46595 ||||| ||||| || || || || Sbjct 127616 CTTCGAGAAGCGGGTAGGAGACTA 127593 >seq2 Length=1425683 Score = 122 bits (134), Expect = 8e-23 Identities = 150/205 (73%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| || || || | ||| | || |||||||| || |||||||| || || Sbjct 869297 CCACCACGCAGGCGGAGGACAAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCACTA 869238 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| |||||||| || ||| |||| | |||||||||||| |||||| Sbjct 869237 AGCGTGCGGCCATCCTCCAGCTGCTTTCCCGCGAAGATCAGACGCTGCTGGTCGGGAGGG 869178 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || || || ||| || ||||| | || | |||||| ||||||||| Sbjct 869177 ATGCCCTCCTTATCCTGGATCTTGGTCTTGACGTTGTCGATGGTATCGCTGGACTCGACC 869118 Query 131188 TCGACGGTAACGGTTTTACCGGTTA 131212 |||| ||| | ||| || ||||||| Sbjct 869117 TCGAGGGTGATGGTCTTGCCGGTTA 869093 Score = 98.7 bits (108), Expect = 9e-16 Identities = 152/217 (70%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| ||| || || | || | ||| || ||||||||||||||||| || | Sbjct 869598 CCACCACGCAGACGAAGGACGAGGTGAAGGGTGGATTCCTTTTGAATGTTGTAGTCAGAC 869539 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || ||||| |||||||| || ||| |||| | ||||||||||||||| || Sbjct 869538 AGGGTACGGCCATCCTCCAGCTGCTTTCCAGCGAAGATCAGACGCTGCTGGTCCGGGGGA 869479 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| || || ||| | | || | || || | ||||| | Sbjct 869478 ATGCCCTCCTTGTCCTGAATCTTGGTCTTCACATTGTCGATGGTGTCAGAAGACTCCACC 869419 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224 || | ||| | ||| || ||||| || || || |||| Sbjct 869418 TCAAGGGTGATGGTCTTTCCGGTCAGGGTCTTGACGA 869382 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || | || | || || || || || |||||||| ||| | Sbjct 869826 CCACCACGGAGACGAAGGACAAGGTGAAGAGTGGATTCTTTCTGGATGTTGTAGTCGGAC 869767 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || ||||| | |||||| || ||| |||| | ||||||||||||||| ||| Sbjct 869766 AAGGTACGGCCATCCTCCAACTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGG 869707 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| || || ||| | | || | || |||| || || | Sbjct 869706 ATGCCTTCCTTGTCTTGAATCTTGGTCTTAACGTTATCAATTGTGTCGGAAGATTCAACT 869647 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | || || || || ||||| || ||||| |||||||| Sbjct 869646 TCCAATGTGATCGTCTTTCCCGTGAGAGTCTTGACGAAGATCTGCAT 869600 >seq237 Length=1094385 Score = 98.7 bits (108), Expect = 9e-16 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| || ||||| || || | ||| |||||||| || |||||||| || Sbjct 4185 CCACCACGCAGGCGGAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAA 4244 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || |||||| |||||||| || ||| |||| | ||||||||||||||| ||| Sbjct 4245 AGAGTACGGCCGTCCTCGAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCCGGGGGG 4304 Query 131128 ATTCCTTCTTTGTC 131141 || || || ||||| Sbjct 4305 ATACCCTCCTTGTC 4318 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472010970950400