Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001715265.1_202016-08-29] 310 sequences; 36,172,237 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq2 96.9 3e-15 >seq2 Length=1425683 Score = 96.9 bits (106), Expect = 3e-15 Identities = 138/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || ||||| |||||||| ||||||||||| | || ||| | | ||||||| || Sbjct 869574 TGAAGGGTGGATTCCTTTTGAATGTTGTAGTCAGACAGGGTACGGCCATCCTCCAGCTGC 869515 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAAT-TTG 16851 || || || | || || ||||| |||||| || | |||||| ||||| ||| ||| Sbjct 869514 TTTCCAGCGAAGATCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGAATCTTG 869455 Query 16852 CTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGT 16911 | |||||| | | | | ||||| | |||| || | ||||||||| |||||||| Sbjct 869454 GT-CTTCACATTGTCGATGGTGTCAGAAGACTCCACCTCAAGGGTGATGGTCTTTCCGGT 869396 Query 16912 CAGCGTTTTGAC 16923 ||| || ||||| Sbjct 869395 CAGGGTCTTGAC 869384 Score = 82.4 bits (90), Expect = 6e-11 Identities = 142/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || ||||| || || || ||||||||||||| || ||| | | |||||||| || Sbjct 869802 TGAAGAGTGGATTCTTTCTGGATGTTGTAGTCGGACAAGGTACGGCCATCCTCCAACTGC 869743 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAAT-TTG 16851 || || || | || || ||||| |||||| || | ||| || ||||| ||| ||| Sbjct 869742 TTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCTTCCTTGTCTTGAATCTTG 869683 Query 16852 CTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGT 16911 | ||| || | | | |||||| | || ||||| ||||| || ||||| || Sbjct 869682 GT-CTTAACGTTATCAATTGTGTCGGAAGATTCAACTTCCAATGTGATCGTCTTTCCCGT 869624 Query 16912 CAGCGTTTTGACAAAAATCTGCAT 16935 || || ||||| || |||||||| Sbjct 869623 GAGAGTCTTGACGAAGATCTGCAT 869600 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405086469526900