Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001715265.1_202016-08-29] 310 sequences; 36,172,237 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq259 87.8 2e-12 >seq259 Length=165088 Score = 87.8 bits (96), Expect = 2e-12 Identities = 192/287 (67%), Gaps = 3/287 (1%) Strand=Plus/Plus Query 93362 ATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGG 93421 ||||| |||||||| | ||||| || | || || |||| |||||||| || ||| Sbjct 128201 ATGTAGGTATCGATCAGGAGAGAGTAGGTCTCGGAGTGGATGTTCTCCATCATGATCTGG 128260 Query 93422 AATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGA 93481 ||||||||||| || | ||| || | | ||| || || || | ||| || || Sbjct 128261 AATCCGTAGAAGCAACGAGCCTCAGGAACCTGGACCTCGCCGCTGAAGCGCTCGACAAGG 128320 Query 93482 TTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGT 93541 || || ||||| || |||||||| || || || || || | | || || || | Sbjct 128321 TTCTCGTTGACAATGCCATCGGAGGCAGCGAAGAACGCGAGAACGTGGGAGATGAAGTAG 128380 Query 93542 TTCTCATCATCTTTAA---GCTTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCT 93598 ||| || || || | | || | ||| ||| | ||| || || ||||||| ||| Sbjct 128381 CGCTCGTCGTCGTTCAGGCGGTTGTGCCAGTCGTGCAAATCCTTGGACAGATCGATTTCC 128440 Query 93599 TCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATCCCATAT 93645 ||| | ||||| || || || || || || |||||||| | ||| || Sbjct 128441 TCGGCGGTCCAGAAAGAAGCCTCGGCCTTCTTGTACATCTGCCAGAT 128487 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556858642164400