Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20niger_20[genbank_20GCA_5F001715265.1_202016-08-29]
310 sequences; 36,172,237 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq2 111 1e-19
seq45 86.0 5e-12
>seq2
Length=1425683
Score = 111 bits (122), Expect = 1e-19
Identities = 129/174 (74%), Gaps = 0/174 (0%)
Strand=Plus/Plus
Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302
||||| || || |||| ||||| ||||| | | || ||| | ||| || | ||
Sbjct 869396 ACCGGAAAGACCATCACCCTTGAGGTGGAGTCTTCTGACACCATCGACAATGTGAAGACC 869455
Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362
|| ||||| ||||||||||| ||||| || || || || ||||| || || || || ||
Sbjct 869456 AAGATTCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGTCTGATCTTCGCTGGAAAG 869515
Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACC 22416
||| | |||||| ||| ||| | || || |||||||||||||| |||||||||
Sbjct 869516 CAGCTGGAGGATGGCCGTACCCTGTCTGACTACAACATTCAAAAGGAATCCACC 869569
Score = 107 bits (118), Expect = 2e-18
Identities = 142/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || || || || ||| | || || || ||| |||| | ||||| ||| | ||
Sbjct 869600 ATGCAGATCTTCGTCAAGACTCTCACGGGAAAGACGATCACATTGGAAGTTGAATCTTCC 869659
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | || | | || || |||||||||||||| || || || || || ||
Sbjct 869660 GACACAATTGATAACGTTAAGACCAAGATTCAAGACAAGGAAGGCATCCCCCCGGACCAG 869719
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| ||||| || || || || || ||||| |||||| ||| ||| | ||||| ||||||
Sbjct 869720 CAGCGTCTCATCTTCGCTGGTAAGCAGTTGGAGGATGGCCGTACCTTGTCCGACTACAAC 869779
Query 22399 ATTCAAAAAGAATCCAC 22415
|| || |||||||||||
Sbjct 869780 ATCCAGAAAGAATCCAC 869796
Score = 105 bits (116), Expect = 6e-18
Identities = 138/191 (72%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || || || || ||| | ||||| || ||| | || || || ||||| | | |
Sbjct 869828 ATGCAGATCTTCGTGAAGACTCTTACCGGCAAGACGATTACGCTGGAGGTGGAGAGCTCG 869887
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|||||| | || | |||| || |||||||| |||||||| ||||| || || ||
Sbjct 869888 GATACCATTGATAACGTCAAGACTAAGATTCAAGATAAGGAGGGCATTCCCCCGGACCAG 869947
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| ||||| || || || || || ||||| || ||| || || ||||||||||||||
Sbjct 869948 CAGCGTCTCATCTTCGCTGGTAAGCAGTTGGAAGATGGACGTACGCTCTCCGATTACAAC 870007
Query 22399 ATTCAAAAAGA 22409
|| || || ||
Sbjct 870008 ATCCAGAAGGA 870018
>seq45
Length=445819
Score = 86.0 bits (94), Expect = 5e-12
Identities = 127/180 (71%), Gaps = 0/180 (0%)
Strand=Plus/Plus
Query 22227 TTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGT 22286
||| || || || | || ||||| || | || || || || || | | ||| ||| |
Sbjct 202347 TTTCGTCAAGACCCTCACGGGTAAGACCATTACCCTCGACGTCGAGTCGAGCGACACCAT 202406
Query 22287 GGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCT 22346
||| | |||| || || || |||||||||||||| || || ||||| || |||||
Sbjct 202407 CGACAACGTCAAGACCAAGATCCAGGACAAGGAGGGTATCCCCCCGGATCAGCAGCGTCT 202466
Query 22347 TATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAA 22406
||| || || || || ||| | |||||| ||||||| | ||| |||||||| || ||
Sbjct 202467 TATCTTCGCTGGTAAGCAGCTTGAGGATGGCCGCACCCTGAGCGACTACAACATCCAGAA 202526
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419726414215150
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |