Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001715265.1_202016-08-29] 310 sequences; 36,172,237 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq259 239 8e-58 seq248 161 2e-34 >seq259 Length=165088 Score = 239 bits (264), Expect = 8e-58 Identities = 369/518 (71%), Gaps = 13/518 (3%) Strand=Plus/Minus Query 42633 CCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACG 42692 |||||||| |||||||| || ||||| | || |||||| || || | || Sbjct 128098 CCCTGCATTGCCAAGAAGGCCGATTGGGCCATTAAGTGGATCCAGGACAGGGAGTCGACC 128039 Query 42693 TTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTC 42752 |||| || | || || || || | ||||| ||||| ||||||||||| ||| ||||| Sbjct 128038 TTCGCTCAGCGTCTCGTTGCTTTCGCTGCCGTTGAGGGTATCTTCTTCTCCGGCTCCTTC 127979 Query 42753 GCCTCCATCTTCTGGCTCAAGCAGAA-GGTGTCGATGCCCGGACTCACCTTCTCGAACGA 42811 || |||||||||||||||||| || ||| || ||||| || ||||||||||| ||||| Sbjct 127978 GCTTCCATCTTCTGGCTCAAGAAGCGTGGTCTC-ATGCCTGGTCTCACCTTCTCCAACGA 127920 Query 42812 ACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCA 42871 |||||| | |||||||| ||||| | ||||| || ||||| |||||||| ||| Sbjct 127919 GCTCATCTCTCGTGACGAGGGTCTGCACACCGACTTCGCTTGCCTGCTGTTCTC---CCA 127863 Query 42872 CCTCAGGCACAA--GCCCTCG-AAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGA 42928 ||| | |||| |||| | || || || | ||| ||| |||||||| | Sbjct 127862 CCT---GAACAACCGCCCCAGCAAACAGGTTGTTGAAGACATTATCGTCGAGGCCGTCGG 127806 Query 42929 GATCGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGA 42988 || ||| |||||||||| || | | |||||||| | ||| | ||||||||| | | Sbjct 127805 CATTGAGCAGGAGTTCCTGACTGACGCTCTGCCCGTTGCTCTGCTGGGCATGAACTCCAA 127746 Query 42989 CCTCATGTGCAAGTACATCCAGTACGTCGCCGACCATCTCCT-GTGCCAGATGGGTCTCA 43047 || ||||| |||||||| ||| ||||| |||| || || ||| | | || || Sbjct 127745 GCTGATGTGTCAGTACATCGAGTTTGTCGCGGACCGCCTGCTGGTGGC-CCTCGGCAACA 127687 Query 43048 GCCGCCTCTACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCA 43107 ||||||| | | |||||||||||| |||||| |||||| ||| ||| | Sbjct 127686 AGAAGTACTACAACGCCACCAACCCCTTCGACTTCATGGAGTCGATCTCGCTGGCGGGTA 127627 Query 43108 AGACCAACTTTTTCGAGAAGCGCGTCGCCGACTACCAG 43145 |||||||||| ||||||||||| || | ||||||||| Sbjct 127626 AGACCAACTTCTTCGAGAAGCGGGTAGGAGACTACCAG 127589 >seq248 Length=549880 Score = 161 bits (178), Expect = 2e-34 Identities = 727/1143 (64%), Gaps = 37/1143 (3%) Strand=Plus/Minus Query 243737 ACGCTGAACTGGACGGGTGCGACGGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTG 243796 ||| ||||||||| ||| || ||||||| | || | |||||||||||| || ||||| Sbjct 23738 ACGGTGAACTGGATGGGCGCAGAGGCGGCCATCGTGCGCAGGTAGTACATACCCGTCTTC 23679 Query 243797 AGTCCACTGGACCAGGCGTGGAGGTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTGGG 243856 || || | |||| || | ||||||| || | ||| ||| || ||| Sbjct 23678 AGACCCATCTTCCAGCCGGCAAAGTGCATGCTGGTGATCTTGCCCATGGTGGGCT----- 23624 Query 243857 TCGTCCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCT 243916 ||| ||| || |||||||||||| |||||| | ||| | | || || Sbjct 23623 ----CCTT---CAGGTGGATGTTGAGGGACTGAGACTGGTCAATGAACGCACCACGGTCC 23571 Query 243917 GCGGCCATGGTGATGAG-GTCCTTCTGAGATATCTCATACGCCGTCTTGTAGATGGGCTT 243975 || ||||| | || |||| ||| || ||||| || |||||||||| | | ||| Sbjct 23570 GCTGCCATCTGCAGGATCGTCCG-CTGGGAGATCTCCCACACCGTCTTGTACAGCGCCTT 23512 Query 243976 GAGGTGCTCGGGGAACCCTTCGATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGT 244035 || || ||||| ||||||||| || || || | | | |||| || | Sbjct 23511 GATGTCACTGGGGATGTTGGGGATGTTCTGGACGGAACCACCCTCGGCAATGATGCGGTT 23452 Query 244036 GCGCATGTTATCGTTCCACAGGCCCA-AGCGCTCCAGCGCCTCGACCAGGTGCCTGTTCA 244094 |||||| || ||||||||| | | || |||| ||| | ||| ||| | Sbjct 23451 CTTCATGTTGTCCGACCACAGGCCGAGATCGA-CCAGGTCCTTCAGCAGCCAGGGGTTGA 23393 Query 244095 CCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGA 244154 ||||||| ||||| || | || || ||||| ||||| |||| | || ||||||| Sbjct 23392 CCACCTGGAACTCACCAGCCAAGACACGGCGGGAGTAGATGTTGGAGGTGTAAGGCTCGA 23333 Query 244155 TGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCA 244214 || ||| || ||||| ||||| || || ||||| |||||||| | ||||||| Sbjct 23332 AGCACTCGTTGAAGCCCAAGATCTGACTGGTACTGGCAGTGGGCATGGGGGCGACCAGCA 23273 Query 244215 GACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCCACATGC 244274 ||||| | || || ||||| ||| ||| || | | || | || | Sbjct 23272 AGCTGTTGCGGACACCAG---TCTGG--GCGA--TCTTGGC-CTTGAGAGCAGCCCAGTC 23221 Query 244275 CCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGACGG 244334 || ||||||| | | || || |||||||||| |||| || | |||| | ||| | Sbjct 23220 CC-AGAGGTCAGTGGGAGTGCGGTCCCACATGTCGTACTGAAGGATACCCTGGGAGACAG 23162 Query 244335 GGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTACAGCTCTCGTCGA 244394 | |||||||||||| ||| | ||| || ||| || | | || | Sbjct 23161 GAGATCCCTCGTAGGTCTCGTAAGTTCCGAACTCCTTGGCGAGATCGGACGAGGCGGTCA 23102 Query 244395 GGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGCAGG 244454 | |||| |||||||||||||||||| |||||| | | ||||| | | || Sbjct 23101 AACCAGCGTGATAGATGGTCTCGAAGATCTGGATGTTCAGCTGTCTGGCCTCGGCCGAGT 23042 Query 244455 TGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGATGG 244514 |||||| | || | | ||| | || ||||| || | || || | | |||| Sbjct 23041 CGAAGGGCAGGCGGAGAGCGAGGAAAGCATCAGCCAGACCGTTGACACCCAGCGCAATGG 22982 Query 244515 GTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGATCA 244574 | | ||| || |||||| | |||| || || |||||||| ||||| |||||| | Sbjct 22981 GACGGTGACGGAAGTTGGACTTCTTGGCCTCCGGGACGGGGTAGTAGTTGATGTCGATGA 22922 Query 244575 CCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCGTACT 244634 |||||| | ||| ||| | | ||||||| ||| ||| |||||| |||| Sbjct 22921 TCTTGTTCAAGTTACGGACCAAGACCTGGACGACCTCGTGGAGCTTGCCAAAGTCATACT 22862 Query 244635 CGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGGCCAGGT 244694 || | || | | ||| | ||| | | ||||| | ||| |||| Sbjct 22861 CGCCGCGAGCAGCATCGACG-----------AAAGTAGGA-AGGGCAAGAGAGGCAAGGT 22814 Query 244695 TGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTGC 244754 ||||||| || ||||| |||| |||||| | ||||| ||||||||||| || Sbjct 22813 TGCAGACAGCAACCTCATCCGGAGCACTGTACTCAATGATCTCAGTGCAGAGGTTGGAGC 22754 Query 244755 ACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCA 244814 |||||| || |||| || || ||| ||| |||||| || |||||||| |||| Sbjct 22753 TACGGATGGTTCCGAGGTTCTTCTGGTTGCTCTTCTTGTTGCAAGCATCCTTGTACAGCA 22694 Query 244815 TGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAGCCT 244874 ||||||| || |||||| ||| || | || | || |||||| | | ||||| Sbjct 22693 TGAAGGGGTTACCAGTCTCGGTCTGAGCCTCCAGAATAGCGTACCAGAGCTTCTGAGCCT 22634 Query 244875 TGA 244877 ||| Sbjct 22633 TGA 22631 Score = 159 bits (176), Expect = 7e-34 Identities = 362/533 (68%), Gaps = 16/533 (3%) Strand=Plus/Minus Query 244915 GTACAGGGCCTCGAACTCGGGGCCCCAGACCTCGTCTAGGCC-GGGGCA-CGACGCCGGG 244972 ||| ||||| ||||||||| || |||| || | | ||| ||||| || | ||| Sbjct 22544 GTAGAGGGCGTCGAACTCGTCACCGTAGACATCAGCCAAGCCAGGGGCTTCGTTG--GGG 22487 Query 244973 CACATGAGACTCCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAG 245032 || | ||| |||| |||||| ||| || | || |||||| || || || |||| Sbjct 22486 CAGAACAGAGTCCAGTCGCCGTTCGCCTCAACACGCTTCATGAACAGATCCGGAGTCCAC 22427 Query 245033 AGGGCCTGGAAGAGGTCCCTGGTCCTCTG--CTCGTCCGAGCCAGTGTTCTTCCTCAGCT 245090 ||||| | ||| || || | || ||||| ||| ||| || |||||| | || | Sbjct 22426 AGGGCATAGAACAGATCGCGGG--CTCTGACCTCCTCCTTACCGTGGTTCTTACGGAGGT 22369 Query 245091 CCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCC 245150 ||| || || ||||| || |||||||||||| | ||||| || | || ||||| | Sbjct 22368 CCAGGAACTCGAAGACATCCGAGTGCCAGGGCTCAAGGTAGATGGCAAAAGCACCGGGAC 22309 Query 245151 GCTTGTTGCCTCCCTGGTCCACCATCCTCTCGAGCG-CGTTGAAGATGCGCAGGGTAGGC 245209 |||||||||| |||||||| || || | || | |||||| | || || | || Sbjct 22308 GCTTGTTGCCACCCTGGTCAACGTATCTGGC-AGTGTTGTTGAAAACCCGAAGCATGGGA 22250 Query 245210 ACTATGCCGTTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTT---GCCCCTGAGG 245266 || | ||||| ||| ||||||||||| ||||| | || | || || || Sbjct 22249 ACAAGACCGTTGGAGGTACCGTTGGTGCCACCAATGTAAGATCCGGTAGAGCGGATGCGG 22190 Query 245267 TTGCTGATGGACATGCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATG 245326 ||| | | || || | || |||||| ||||||||| | ||||| |||| | Sbjct 22189 -TGC--ACGTTCAGACCAATACCACCGGCGGTCTTGGAGATCATAGCGCAAGTCTTCAAA 22133 Query 245327 GTGTCTGCTATGCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGC 245386 ||||| || || || ||||||||| |||||||| || || ||||| |||| ||| Sbjct 22132 GTGTCGTAGATACCGTCAATGCTGTCCTCCTTCATGTCGACGAGGAAGCAAGAGGCAAGC 22073 Query 245387 TGGGGCTTGGGGCTGCACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAAGTA 245439 || |||| ||| | | | |||||||||||| ||| |||||| || ||||| Sbjct 22072 TGAGGCTGGGGAGTACCAGCGTTGAACAGAGTCGGGGAGGCGTGAGTGAAGTA 22020 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944335540685600