Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001715265.1_202016-08-29] 310 sequences; 36,172,237 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq259 132 6e-26 seq248 111 2e-19 seq160 82.4 9e-11 >seq259 Length=165088 Score = 132 bits (146), Expect = 6e-26 Identities = 158/213 (74%), Gaps = 6/213 (3%) Strand=Plus/Plus Query 126058 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACC 126117 ||| |||||||||||||| |||||||| || || |||||| || || ||||||||||| Sbjct 127892 GTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTGAGACCAGGCATGAGACC 127951 Query 126118 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACA 126177 |||||||| | |||||| || | | || || || ||||||||||| ||||| || Sbjct 127952 ACGCTTCTTGAGCCAGAAGATGGAAGCGAAGGAGCCGGAGAAGAAGATACCCTCAACGGC 128011 Query 126178 CGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTC---AAACCACTTCAT 126234 ||||| |||| |||||||| ||| |||| ||||| |||| | |||||| || Sbjct 128012 AGCGAAAGCAACGAGACGCTGAGCGAAGG---TCGACTCCCTGTCCTGGATCCACTTAAT 128068 Query 126235 CGCCCACTGCGCCTTTTTCTCGATACACGGGAC 126267 ||||| | ||||| || | || || ||||| Sbjct 128069 GGCCCAATCGGCCTTCTTGGCAATGCAGGGGAC 128101 >seq248 Length=549880 Score = 111 bits (122), Expect = 2e-19 Identities = 459/719 (64%), Gaps = 14/719 (2%) Strand=Plus/Minus Query 113942 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAG 114001 ||||| |||| ||||| ||||| |||||||| ||| |||||||| || ||| | Sbjct 23357 TAGATGTTGGAGGTGTAAGGCTCGAAGCACTCGTTGAAGCCCAAGATCTGACTGGTACTG 23298 Query 114002 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCC 114061 || ||||||||||| || | || | |||||| |||| ||| | | || || Sbjct 23297 GCAGTGGGCATGGGGGCGACCAGCAAGCTGTTGCGGACACCAGTCTGGGCGATCTTGGCC 23238 Query 114062 TTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGG 114121 ||||| || ||||||| || | | | | | |||||| || |||| ||| Sbjct 23237 TTGAGAGCAGCCCAGTCCCAGAGGTCAGTGGGAGTGCGGTCCCACATGTCGTACTGAAGG 23178 Query 114122 ATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAAT 114181 ||||| |||||| | || |||||||| | |||||||| | || ||| || | Sbjct 23177 ATACCCTGGGAGACAGGAGATCCCTCGTAGGTCTCGTAAGTTCCGAACTCCTTGGCGAGA 23118 Query 114182 TCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCAT-TGC 114240 ||||| || | | |||||||| || ||||| || || | |||| || Sbjct 23117 TCGGACGAGGCGGTCAAACCAGCGTGATAGATGGTCTCGAAGATCTGGATGTTCAGCTGT 23058 Query 114241 CTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTG 114300 || ||||||| | || || || | || ||| | || |||| || ||||| | Sbjct 23057 CT-GGCCTCGGCCGAGTCGAAGGGCAGGCGGAGAGCGAGGAAAGCATCAGCCAGACCGTT 22999 Query 114301 GACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCC---ACGGG 114357 |||||| || |||| || || || | | || ||||| || |||| ||||| Sbjct 22998 GACACCCAGCGCAATGGGACGGTGACGGAAGTTGGACTTCTTGGC---CTCCGGGACGGG 22942 Query 114358 ATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATG 114417 || | || | ||||| | | | || | || | | |||| || || || Sbjct 22941 GTAGTAGTTGATGTCGATGATCTTGTTCAAGTTACGGACCAAGACCTGGACGACCTCGTG 22882 Query 114418 AAGCTTTTCGTAATCAAAA---CTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGAT 114474 ||||| | | ||| | | ||||| | ||| ||| | |||||||||| | Sbjct 22881 GAGCTTGCCAAAGTCATACTCGCCGCGAG---CAGCATCGACGAAAGTAGGAAGGGCAAG 22825 Query 114475 TGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACA 114534 || || || || || |||| ||||||| | || ||||||| || || || || || Sbjct 22824 AGAGGCAAGGTTGCAGACAGCAACCTCATCCGGAGCACTGTACTCAATGATCTCAGTGCA 22765 Query 114535 CAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATC 114594 | || || || ||||| || | |||||| || || ||| |||| || ||||| Sbjct 22764 GAGGTTGGAGCTACGGATGGTTCCGAGGTTCTTCTGGTTGCTCTTCTTGTTGCAAGCATC 22705 Query 114595 CTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA 114653 |||||| |||||| | || | || ||||| || || | || |||||||| | ||||| Sbjct 22704 CTTGTACAGCATGAAGGGGTTACCAGTCTCGGTCTGAGCCTCCAGAATAGCGTACCAGA 22646 >seq160 Length=705468 Score = 82.4 bits (90), Expect = 9e-11 Identities = 165/239 (69%), Gaps = 12/239 (5%) Strand=Plus/Plus Query 10958 TTACCGACGGCGTCAATTTCATCGATGAAAACGATACACG--GTTGATTTTCACGGGCAA 11015 ||||||| || ||||||||||||||||| | || || | || ||||| | || | Sbjct 91635 TTACCGATAGCATCAATTTCATCGATGAAGATAATGCAGGGCGTCGATTTCCGCGCG--- 91691 Query 11016 CTT--CAAAGATATCTCGGACTCTCTTGGCACCGACACCCACAAACATTTCCACAAAATT 11073 || | || | ||| || |||| | ||||||||| |||||||| || ||||| | Sbjct 91692 -TTGGCGAACAGATCACGAACTCGGGAAGGACCGACACCGACAAACATCTCGACAAACTC 91750 Query 11074 GG--CGGCGGAACATTGGATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGAGG 11131 | | | | ||| | || |||||| ||| ||||||||| || |||| ||| || Sbjct 91751 CGAACCACTG-ACACT-GAAGAAGGGCACGCCGGATTCACCAGCCGTGGCCTTGGCAAGT 91808 Query 11132 AGGGTCTTCCCCGTCCCAGGTTTCCCTGCGAGAAGGGCACCACGTGGGATCCTGGCACC 11190 | ||||| || || || || || | |||| ||||||||| ||||| ||||||| Sbjct 91809 AACGTCTTACCGGTACCCGGAGGACCCGAAAGAATGGCACCACGGGGGATTTTGGCACC 91867 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597351285254800