Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20niger_20[genbank_20GCA_5F001715265.1_202016-08-29]
310 sequences; 36,172,237 total letters
Query= NC_011616.1
Length=148634
Score E
Sequences producing significant alignments: (Bits) Value
seq259 118 1e-21
seq2 113 4e-20
seq45 98.7 9e-16
seq216 89.7 5e-13
>seq259
Length=165088
Score = 118 bits (130), Expect = 1e-21
Identities = 296/445 (67%), Gaps = 31/445 (7%)
Strand=Plus/Minus
Query 47148 GCTTTCGCCATCGTCGAGGGCGTCTTCTTCTCGGGCAGCTTTGCGGCGATATTTTACATG 47207
|||||||| ||| ||||| |||||||||| ||| ||| || | || || | |
Sbjct 128020 GCTTTCGCTGCCGTTGAGGGTATCTTCTTCTCCGGCTCCTTCGCTTCCATCTTCTGGCTC 127961
Query 47208 AAAACCAAAGGAGTTATGCCCGGCCTCACGTTTAGCAACGAGCTAATCTCGAGAGACGAA 47267
|| | || | ||||| || ||||| || ||||||||| ||||| | |||||
Sbjct 127960 AAGAAGCGTGGTCTCATGCCTGGTCTCACCTTCTCCAACGAGCTCATCTCTCGTGACGAG 127901
Query 47268 GGCCTGCACACCAACTT----TGCCTGTCTCTACTACAACACTAGAGTCGATCAAAAGTT 47323
|| ||||||||| |||| |||||| || | || | || || || ||| |
Sbjct 127900 GGTCTGCACACCGACTTCGCTTGCCTG-CTGTTCTCCCAC-CT------GAACAACCGCC 127849
Query 47324 GGACGTGCCCACCGTCAGC----GACATGTTTGCCGAAGCCGTCGCCATTGAGATGGAGT 47379
| || || | | ||||| | | ||| ||||||| ||||||| |||||
Sbjct 127848 CCA---GCAAACAGGTTGTTGAAGACATTATCGTCGAGGCCGTCGGCATTGAGCAGGAGT 127792
Query 47380 TTTTCGCCGAGGCTCTGCCCGAATCTTTAGTGGGAATGAACGCGGAGATGATGAGAAAGT 47439
| | | || |||||||||| || | |||| |||||| | || ||||| | |||
Sbjct 127791 TCCTGACTGACGCTCTGCCCGTTGCTCTGCTGGGCATGAACTCCAAGCTGATGTGTCAGT 127732
Query 47440 ACATCGAATTTGTCGCCGACCGCCTGCTCGT-----TCAGCTA-AAGTATCCCAAGATTT 47493
||||||| |||||||| ||||||||||| || || || | ||| ||| |
Sbjct 127731 ACATCGAGTTTGTCGCGGACCGCCTGCTGGTGGCCCTCGGCAACAAG------AAGTACT 127678
Query 47494 ACCACACCGAGAATCCATTCGAGTTTATGAACAACATTTCGCTCGAGGGCAAGACCAACT 47553
|| || || || || ||||| || ||| | || ||||| | ||| ||||||||||
Sbjct 127677 ACAACGCCACCAACCCCTTCGACTTCATGGAGTCGATCTCGCTGGCGGGTAAGACCAACT 127618
Query 47554 TTTTCGAGAAGCGCGTCGGCGAATA 47578
| ||||||||||| || || || ||
Sbjct 127617 TCTTCGAGAAGCGGGTAGGAGACTA 127593
>seq2
Length=1425683
Score = 113 bits (124), Expect = 4e-20
Identities = 131/174 (75%), Gaps = 2/174 (1%)
Strand=Plus/Minus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|||||||| || || || ||||| || | | |||||| ||| || ||||| |||||
Sbjct 869267 GTAGACTCCTTCTGGATGTTGTAGTCACTAAGCGTGCGGCCATCCTCCAGCTGCTTTCCC 869208
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036
||| |||||| |||||||| |||||||| ||||||||||| ||| ||| || ||||
Sbjct 869207 GCGAAGATCAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTATCCTGGATCTTGGTCTTG 869148
Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGT 127089
| |||| |||| ||| || | |||||| |||| ||| | || ||||||||
Sbjct 869147 ACGTTG-TCGATGGTATCGCTGGACTCGACCTCGAGGGTGATGGTCTTGCCGGT 869095
Score = 95.1 bits (104), Expect = 1e-14
Identities = 132/185 (71%), Gaps = 0/185 (0%)
Strand=Plus/Minus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|| || || |||||||| ||||| || || || || ||| || ||||| ||||||
Sbjct 869568 GTGGATTCCTTTTGAATGTTGTAGTCAGACAGGGTACGGCCATCCTCCAGCTGCTTTCCA 869509
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036
||| |||||| |||||||| || || || ||||||||||||||| || || |||
Sbjct 869508 GCGAAGATCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGAATCTTGGTCTTC 869449
Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096
| | |||| |||||| | | ||| || || | ||| | || || |||||||| ||
Sbjct 869448 ACATTGTCGATGGTGTCAGAAGACTCCACCTCAAGGGTGATGGTCTTTCCGGTCAGGGTC 869389
Query 127097 TTTAC 127101
|| ||
Sbjct 869388 TTGAC 869384
Score = 95.1 bits (104), Expect = 1e-14
Identities = 136/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 126922 CTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTA 126981
||| || || || ||||||||| | ||| || ||| || | ||| || |||||| |
Sbjct 870019 CTCCTTCTGGATGTTGTAATCGGAGAGCGTACGTCCATCTTCCAACTGCTTACCAGCGAA 869960
Query 126982 GATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTG 127041
||| | |||||||| || || || ||||||||||| || || || ||||| |
Sbjct 869959 GATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTATCTTGAATCTTAGTCTTGACGTT 869900
Query 127042 TTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 127101
|| | ||| |||| ||||| || || | || | ||| |||||||| ||||| || ||
Sbjct 869899 ATCAATGGTATCCGAGCTCTCCACCTCCAGCGTAATCGTCTTGCCGGTAAGAGTCTTCAC 869840
Query 127102 AAAAATCTGCAT 127113
|| ||||||||
Sbjct 869839 GAAGATCTGCAT 869828
>seq45
Length=445819
Score = 98.7 bits (108), Expect = 9e-16
Identities = 132/181 (73%), Gaps = 2/181 (1%)
Strand=Plus/Minus
Query 126926 TTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATC 126985
|| || || ||||| |||| || ||||| ||| || ||||| || |||||| ||||
Sbjct 202526 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGATA 202467
Query 126986 AATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTC 127044
| ||||||||||| || || || |||||||||||| ||| || ||||| |||| ||
Sbjct 202466 AGACGCTGCTGATCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGTCTTGACGTTG-TC 202408
Query 127045 GACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 127104
|| |||||| | |||||| |||| ||| | || || || || || || || || ||
Sbjct 202407 GATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTGAGGGTCTTGACGAA 202348
Query 127105 A 127105
|
Sbjct 202347 A 202347
>seq216
Length=569298
Score = 89.7 bits (98), Expect = 5e-13
Identities = 97/129 (75%), Gaps = 0/129 (0%)
Strand=Plus/Plus
Query 50662 GTTGCCCAGATCGCCGACGTGGCGGTCGACGGCGTTGGGAGCGCCGTGGTTGCGGCCCAA 50721
|||||| || || |||||||| || ||| || | | |||||| |||||| | ||| ||
Sbjct 456224 GTTGCCAAGGTCACCGACGTGACGCTCGTCGTCCTCGGGAGCACCGTGGGTCTTGCCGAA 456283
Query 50722 CGGATTAAAGTGCTCGCCGGCCGACGTGCAGCCGTTGCTCGTGTCGCCGAATTCGTGCAC 50781
|| || ||||| ||| || || |||||||||||| | |||| ||||| | ||| ||
Sbjct 456284 GGGGTTGAAGTGAGGGCCAGCGGAGGTGCAGCCGTTGGTGTTGTCACCGAACTGGTGGAC 456343
Query 50782 GTGGAACCC 50790
|||||| ||
Sbjct 456344 GTGGAAGCC 456352
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475498957434400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |