Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20niger_20[genbank_20GCA_5F001715265.1_202016-08-29]
310 sequences; 36,172,237 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq259 125 9e-24
seq248 98.7 1e-15
seq160 82.4 9e-11
>seq259
Length=165088
Score = 125 bits (138), Expect = 9e-24
Identities = 156/211 (74%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 127531 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 127590
||| |||||||||||||| |||||||| || || |||||| ||||| |||||||||||
Sbjct 127892 GTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTGAGACCAGGCATGAGACC 127951
Query 127591 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 127650
|||||||| | |||||| || | | || ||||| ||||||||||| ||||| ||
Sbjct 127952 ACGCTTCTTGAGCCAGAAGATGGAAGCGAAGGAGCCGGAGAAGAAGATACCCTCAACGGC 128011
Query 127651 CGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGT-ATCAAACCACTTCATCG 127709
||||| |||| ||||||| || |||| || | ||| | | |||||| || |
Sbjct 128012 AGCGAAAGCAACGAGACGCTGAGCGAAGG-TCGACTCCCTGTCCTGGATCCACTTAATGG 128070
Query 127710 CCCACTGTGCCTTTTTCTCGATACATGGGAC 127740
|||| | ||||| || | || || |||||
Sbjct 128071 CCCAATCGGCCTTCTTGGCAATGCAGGGGAC 128101
>seq248
Length=549880
Score = 98.7 bits (108), Expect = 1e-15
Identities = 455/717 (63%), Gaps = 14/717 (2%)
Strand=Plus/Minus
Query 115903 TAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 115962
|||||||||| ||||| ||||| |||||||| ||| |||||||| || || |
Sbjct 23357 TAGATGTTGGAGGTGTAAGGCTCGAAGCACTCGTTGAAGCCCAAGATCTGACTGGTACTG 23298
Query 115963 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCC 116022
|| ||||||||||| || | || | ||||||||||| ||| | || ||
Sbjct 23297 GCAGTGGGCATGGGGGCGACCAGCAAGCTGTTGCGGACACCAGTCTGGGCGATCTTGGCC 23238
Query 116023 TTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGAGG 116082
||||| || ||||||| || | | | | |||||||| || |||| |||
Sbjct 23237 TTGAGAGCAGCCCAGTCCCAGAGGTCAGTGGGAGTGCGGTCCCACATGTCGTACTGAAGG 23178
Query 116083 ATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAAT 116142
||||| ||||| | || |||||||| | ||||| || | || ||| || |
Sbjct 23177 ATACCCTGGGAGACAGGAGATCCCTCGTAGGTCTCGTAAGTTCCGAACTCCTTGGCGAGA 23118
Query 116143 TCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCAT-TGC 116201
||||| || | | |||||||| || ||||| || || | |||| ||
Sbjct 23117 TCGGACGAGGCGGTCAAACCAGCGTGATAGATGGTCTCGAAGATCTGGATGTTCAGCTGT 23058
Query 116202 CTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCTTG 116261
|| ||||||| | || || || | || ||| | || |||| || ||||| |
Sbjct 23057 CT-GGCCTCGGCCGAGTCGAAGGGCAGGCGGAGAGCGAGGAAAGCATCAGCCAGACCGTT 22999
Query 116262 GACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCC---ACGGG 116318
|||||| || |||| || || || | | || ||||| || |||| |||||
Sbjct 22998 GACACCCAGCGCAATGGGACGGTGACGGAAGTTGGACTTCTTGGC---CTCCGGGACGGG 22942
Query 116319 ATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATG 116378
|| | || | ||||| | | | || | || | | |||| || || ||
Sbjct 22941 GTAGTAGTTGATGTCGATGATCTTGTTCAAGTTACGGACCAAGACCTGGACGACCTCGTG 22882
Query 116379 AAGCTTTTCGTAATCAAAA---CTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGAT 116435
||||| | | ||| | | ||||| | ||| ||| | |||||||||| |
Sbjct 22881 GAGCTTGCCAAAGTCATACTCGCCGCGAG---CAGCATCGACGAAAGTAGGAAGGGCAAG 22825
Query 116436 TGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACA 116495
|| || || || || |||| ||||||| | || ||||||| || || || || ||
Sbjct 22824 AGAGGCAAGGTTGCAGACAGCAACCTCATCCGGAGCACTGTACTCAATGATCTCAGTGCA 22765
Query 116496 CAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATC 116555
| || || || ||||| || | |||||| || || ||| |||| || |||||
Sbjct 22764 GAGGTTGGAGCTACGGATGGTTCCGAGGTTCTTCTGGTTGCTCTTCTTGTTGCAAGCATC 22705
Query 116556 CTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCA 116612
|||||| ||||| | || | || ||||| || || | || |||||||| | |||
Sbjct 22704 CTTGTACAGCATGAAGGGGTTACCAGTCTCGGTCTGAGCCTCCAGAATAGCGTACCA 22648
>seq160
Length=705468
Score = 82.4 bits (90), Expect = 9e-11
Identities = 165/239 (69%), Gaps = 12/239 (5%)
Strand=Plus/Plus
Query 12873 TTACCGACGGCGTCAATTTCGTCAATGAAAACGATACACGG--TTGATTTTCACGGGCAA 12930
||||||| || |||||||| || ||||| | || || || | ||||| | || |
Sbjct 91635 TTACCGATAGCATCAATTTCATCGATGAAGATAATGCAGGGCGTCGATTTCCGCGCG--- 91691
Query 12931 CTT--CAAAGATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATT 12988
|| | || | ||| || |||| | ||||||||| ||||||||||| ||||| |
Sbjct 91692 -TTGGCGAACAGATCACGAACTCGGGAAGGACCGACACCGACAAACATCTCGACAAACTC 91750
Query 12989 GG--CGGCGGAACATTGGATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGAGG 13046
| | | | ||| | || |||||| ||| ||||||||| || |||| ||| ||
Sbjct 91751 CGAACCACTG-ACACT-GAAGAAGGGCACGCCGGATTCACCAGCCGTGGCCTTGGCAAGT 91808
Query 13047 AGGGTCTTCCCCGTCCCTGGTTTCCCCGCGAGAAGGGCACCACGTGGGATCCTGGCACC 13105
| ||||| || || || || |||| |||| ||||||||| ||||| |||||||
Sbjct 91809 AACGTCTTACCGGTACCCGGAGGACCCGAAAGAATGGCACCACGGGGGATTTTGGCACC 91867
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613504822659600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |