Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001715265.1_202016-08-29] 310 sequences; 36,172,237 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq2 156 1e-32 seq45 98.7 2e-15 seq237 93.3 1e-13 >seq2 Length=1425683 Score = 156 bits (172), Expect = 1e-32 Identities = 160/209 (77%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||||||||| ||||| || || || |||| ||||||||| | ||| || | ||||| Sbjct 869811 AGGACAAGGTGAAGAGTGGATTCTTTCTGGATGTTGTAGTCGGACAAGGTACGGCCATCC 869752 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 |||| |||||| || |||||||||||||||||||||||||| || ||||| || Sbjct 869751 TCCAACTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCTTCCTTGTCT 869692 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| ||| ||| || | ||||| | | ||| || ||||| ||||||||| Sbjct 869691 TGAATCTTGGTCTTAACGTTATCAATTGTGTCGGAAGATTCAACTTCCAATGTGATCGTC 869632 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || ||||||||||| || || || || || Sbjct 869631 TTTCCCGTGAGAGTCTTGACGAAGATCTG 869603 Score = 136 bits (150), Expect = 9e-27 Identities = 150/200 (75%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| ||||| || || || |||||||| | ||||||||||| || || | ||||| Sbjct 869583 AGGACGAGGTGAAGGGTGGATTCCTTTTGAATGTTGTAGTCAGACAGGGTACGGCCATCC 869524 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 |||||||||||||| |||||||| ||||||||||||||||| ||| || || ||| Sbjct 869523 TCCAGCTGCTTTCCAGCGAAGATCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCC 869464 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| |||||| |||| |||||| | | || || || | ||||| ||| Sbjct 869463 TGAATCTTGGTCTTCACATTGTCGATGGTGTCAGAAGACTCCACCTCAAGGGTGATGGTC 869404 Query 199598 TTACCCGTGAGAGTTTTCAC 199617 || || || || || || || Sbjct 869403 TTTCCGGTCAGGGTCTTGAC 869384 Score = 129 bits (142), Expect = 1e-24 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || ||||| ||||| |||||| |||| |||||| || | | || | ||||||| Sbjct 870039 AGCACCAGGTGCAGAGTGCTCTCCTTCTGGATGTTGTAATCGGAGAGCGTACGTCCATCT 869980 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 |||| |||||| || |||||||||||||||||||||||||| ||| || || || Sbjct 869979 TCCAACTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTATCT 869920 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| ||| ||| || | ||| || | | || || |||| ||| |||||| Sbjct 869919 TGAATCTTAGTCTTGACGTTATCAATGGTATCCGAGCTCTCCACCTCCAGCGTAATCGTC 869860 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || ||||| ||||| || || || Sbjct 869859 TTGCCGGTAAGAGTCTTCACGAAGATCTG 869831 Score = 123 bits (136), Expect = 6e-23 Identities = 140/188 (74%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 |||||||| |||||||| |||||||| |||| |||||||||| | || | ||||| Sbjct 869282 AGGACAAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCACTAAGCGTGCGGCCATCC 869223 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 |||||||||||||| |||||||| |||||||||||||| ||| || || || ||| Sbjct 869222 TCCAGCTGCTTTCCCGCGAAGATCAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTATCC 869163 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| ||| |||| ||| || | | || || || | ||||| ||| Sbjct 869162 TGGATCTTGGTCTTGACGTTGTCGATGGTATCGCTGGACTCGACCTCGAGGGTGATGGTC 869103 Query 199598 TTACCCGT 199605 || || || Sbjct 869102 TTGCCGGT 869095 Score = 91.5 bits (100), Expect = 3e-13 Identities = 70/83 (84%), Gaps = 0/83 (0%) Strand=Plus/Plus Query 200935 CTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAG 200994 || |||||||| || ||||||||||| ||||| | || ||| |||| |||||| ||||| Sbjct 869726 CTCATCTTCGCTGGTAAGCAGTTGGAGGATGGCCGTACCTTGTCCGACTACAACATCCAG 869785 Query 200995 AAAGAGTCTACTCTTCACCTTGT 201017 ||||| || |||||||||||||| Sbjct 869786 AAAGAATCCACTCTTCACCTTGT 869808 >seq45 Length=445819 Score = 98.7 bits (108), Expect = 2e-15 Identities = 131/182 (72%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 199440 CCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGA 199499 |||| |||| ||||||||| || || | ||||| || |||||||| || ||||||| Sbjct 202528 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGA 202469 Query 199500 TGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGATT 199559 | ||||||||||| ||||| || || || ||||| ||||| ||| ||| | Sbjct 202468 TAAGACGCTGCTGATCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGT 202409 Query 199560 CGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACAA 199619 ||| |||||| | | || || || | || || |||||||||||||| || || || | Sbjct 202408 CGATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTGAGGGTCTTGACGA 202349 Query 199620 AA 199621 || Sbjct 202348 AA 202347 >seq237 Length=1094385 Score = 93.3 bits (102), Expect = 1e-13 Identities = 81/101 (80%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || | |||||| || |||||||| |||| ||||||||| | | ||| | || || Sbjct 4200 AGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGGCCGTCC 4259 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518 || |||||||| || |||||||| ||||||||||||||||| Sbjct 4260 TCGAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCCGG 4300 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178916917470770