Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001715265.1_202016-08-29] 310 sequences; 36,172,237 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq2 107 2e-18 seq45 100 3e-16 seq237 89.7 6e-13 >seq2 Length=1425683 Score = 107 bits (118), Expect = 2e-18 Identities = 137/186 (74%), Gaps = 2/186 (1%) Strand=Plus/Minus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 || ||||| | ||| |||||| ||||| |||||||| || ||||| | || || Sbjct 869279 ACAAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCACTAAGCGTGCGGCCATCCTCC 869220 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 |||||||| || ||||| |||| ||||||||||||| || | || |||||| ||| | Sbjct 869219 AGCTGCTTTCCCGCGAAGATCAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTATCCTGG 869160 Query 46505 ATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563 ||||| |||||| ||| | | | || ||||| || || || || | |||||||| || Sbjct 869159 ATCTTGGTCTTGA-CGTTGTCGATGGTATCGCTGGACTCGACCTCGAGGGTGATGGTCTT 869101 Query 46564 GCCCGT 46569 ||| || Sbjct 869100 GCCGGT 869095 Score = 105 bits (116), Expect = 8e-18 Identities = 167/238 (70%), Gaps = 6/238 (3%) Strand=Plus/Minus Query 46359 ATTATTTGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGT 46418 |||| || || || | | ||| | |||||| |||| || |||||||| ||||| |||| Sbjct 870062 ATTAGTTTCCGCCACGGAGACGGAGCACCAGGTGCAGAGTGCTCTCCTTCTGGATGTTGT 870003 Query 46419 AGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGT 46478 | ||||| || || || | || || | |||||| || ||||| || | |||||||||| Sbjct 870002 AATCGGAGAGCGTACGTCCATCTTCCAACTGCTTACCAGCGAAGATGAGACGCTGCTGGT 869943 Query 46479 CGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTC---GC 46535 | | || | || |||||| || ||||| |||||| | | | || || || Sbjct 869942 CCGGGGGAATGCCCTCCTTATCTTGAATCTTAGTCTTGACGTTATCAATGGTATCCGAGC 869883 Query 46536 TCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || ||||| |||| ||| || || ||||| || || || || || ||||| ||||| Sbjct 869882 TC---TCCACCTCCAGCGTAATCGTCTTGCCGGTAAGAGTCTTCACGAAGATCTGCAT 869828 Score = 93.3 bits (102), Expect = 5e-14 Identities = 128/179 (72%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 |||||||| || |||||||| || || || || | || || |||||||| || ||||| Sbjct 869562 TCCTTTTGAATGTTGTAGTCAGACAGGGTACGGCCATCCTCCAGCTGCTTTCCAGCGAAG 869503 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 |||| ||||||||||| | || | || |||||||||| ||||| |||| | | Sbjct 869502 ATCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGAATCTTGGTCTTCACATTG 869443 Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | ||||| || ||||| || | |||||||| || || ||||| || || || Sbjct 869442 TCGATGGTGTCAGAAGACTCCACCTCAAGGGTGATGGTCTTTCCGGTCAGGGTCTTGAC 869384 Score = 87.8 bits (96), Expect = 2e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 || || ||||| ||||||||||| | || || | || || | |||||| || ||||| Sbjct 869790 TCTTTCTGGATGTTGTAGTCGGACAAGGTACGGCCATCCTCCAACTGCTTACCAGCGAAG 869731 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 || | ||||||||||| | || | || |||||||| ||||| |||| | | Sbjct 869730 ATGAGACGCTGCTGGTCCGGGGGGATGCCTTCCTTGTCTTGAATCTTGGTCTTAACGTTA 869671 Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | |||||| ||||| || |||| ||||| || || ||||| || || || || Sbjct 869670 TCAATTGTGTCGGAAGATTCAACTTCCAATGTGATCGTCTTTCCCGTGAGAGTCTTGACG 869611 Query 46583 AAGATTTGCAT 46593 ||||| ||||| Sbjct 869610 AAGATCTGCAT 869600 >seq45 Length=445819 Score = 100 bits (110), Expect = 3e-16 Identities = 133/182 (73%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463 |||| ||||| ||||||||| || ||||| | || || |||||||| || ||||| | Sbjct 202528 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGA 202469 Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG 46523 | | |||||||| || | || | | |||||||||| |||||| |||||| ||| | Sbjct 202468 TAAGACGCTGCTGATCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGTCTTGA-CGTTG 202410 Query 46524 CC-ACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | ||||||||||| || || || | || ||||| || ||||| || || || || Sbjct 202409 TCGATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTGAGGGTCTTGACG 202350 Query 46583 AA 46584 || Sbjct 202349 AA 202348 >seq237 Length=1094385 Score = 89.7 bits (98), Expect = 6e-13 Identities = 79/99 (80%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||| || ||||| || |||| ||||||||||| || ||||| Sbjct 4220 CTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGGCCGTCCTCGAGCTGCTTACCAGCGAA 4279 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 46500 |||| ||||||||||| | || | | ||||||||| Sbjct 4280 GATCAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTC 4318 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565236209701200