Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001715265.1_202016-08-29] 310 sequences; 36,172,237 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq259 100 3e-16 seq160 96.9 4e-15 seq1 86.0 7e-12 seq140 84.2 3e-11 seq66 84.2 3e-11 seq108 82.4 9e-11 >seq259 Length=165088 Score = 100 bits (110), Expect = 3e-16 Identities = 150/210 (71%), Gaps = 5/210 (2%) Strand=Plus/Plus Query 119508 TGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCT 119567 || || || || || |||||||||||||| || |||| || ||||||||||| || Sbjct 127893 TGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTGAGACCAGGCATGAGACCA 127952 Query 119568 CTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAG 119627 | ||||| ||||| ||||||| | || || || |||||||| ||||| || Sbjct 127953 CGCTTCTTGAGCCAGAAGATGGAAGCGAAGGAGCCGGAGAAGAAGATACCCTCAACGGCA 128012 Query 119628 GCGAAAGCGAATAGACGCTCAGCAAAAGGTCGA-GACTTGTC---GAACCACTTGAGAGC 119683 |||||||| | ||||||| ||| |||||||| | |||| || |||||| | || Sbjct 128013 GCGAAAGCAACGAGACGCTGAGC-GAAGGTCGACTCCCTGTCCTGGATCCACTTAATGGC 128071 Query 119684 CCAGTTGGCCTTACGCTCTATGCAGGGGAC 119713 ||| | |||||| | ||||||||||| Sbjct 128072 CCAATCGGCCTTCTTGGCAATGCAGGGGAC 128101 >seq160 Length=705468 Score = 96.9 bits (106), Expect = 4e-15 Identities = 222/327 (68%), Gaps = 8/327 (2%) Strand=Plus/Plus Query 11674 TTACCGACAGCGTCAATCTCATCGATGAATACGATACACGGT-TGGTTGGCACGTGCCTG 11732 ||||||| ||| ||||| ||||||||||| | || || || | | | | || || | Sbjct 91635 TTACCGATAGCATCAATTTCATCGATGAAGATAATGCAGGGCGTCGATTTC-CGCGCGTT 91693 Query 11733 TTCGAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGC 11792 |||| || ||||| || || | || ||||| || |||||||| || || | | Sbjct 91694 GGCGAACAGATCACGAACTCGGGAAGGACCGACACCGACAAACATCTCGACAAACTCCGA 91753 Query 11793 GGCAGA-ACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAG 11851 || |||||||| |||||| || || |||||||| |||| || || | | Sbjct 91754 ACCACTGACACTGAA-GAAGGGCACGCCGGATTCACCAGCCGTGGCCTTGGCAAGTAACG 91812 Query 11852 TCTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACC--ACT 11909 ||||||| ||||| || | ||| | |||| ||| ||||||||||| |||||||| || Sbjct 91813 TCTTACCGGTACCCGGAGGACCCGAAAGAATGGCACCACGGGGGATTTTGGCACCCAGCT 91872 Query 11910 TCCAAAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCTCCTTGGC 11969 || | |||| || || ||||| |||||| || | ||| | |||| |||| || Sbjct 91873 TC--TGGAAGCGTTCCGGGTTCTTCAGGAAGCTGACGAATTCCATGATTTCCACCTTAGC 91930 Query 11970 GGAGTCGATACCCTCAACATCGGTGAA 11996 || ||||| | || |||| ||| Sbjct 91931 TTCATCCATACCAGCCACGTCGGAGAA 91957 >seq1 Length=1876558 Score = 86.0 bits (94), Expect = 7e-12 Identities = 70/85 (82%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 136716 ATAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||||||||||||||||||||||| ||| |||||| ||| ||| ||||||||||||| Sbjct 1861367 ATAGCTCAGTTGGTTAGAGCGTGACGCTAATAACGTCAAAGTCGAGGGTTCGAGCCCCTC 1861426 Query 136776 TGGGAACAGCTTTTAGATATATTTT 136800 ||||| || ||||| | | | |||| Sbjct 1861427 TGGGACCATCTTTTTGCTTTTTTTT 1861451 Score = 84.2 bits (92), Expect = 3e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 136716 ATAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||||||||||||||||||||||| ||| |||||| ||| ||| ||||||||||||| Sbjct 1862687 ATAGCTCAGTTGGTTAGAGCGTGACGCTAATAACGTCAAAGTCGAGGGTTCGAGCCCCTC 1862628 Query 136776 TGGGAACAGCTTTT 136789 ||||| || ||||| Sbjct 1862627 TGGGACCATCTTTT 1862614 >seq140 Length=861570 Score = 84.2 bits (92), Expect = 3e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 136716 ATAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||||||||||||||||||||||| ||| |||||| ||| ||| ||||||||||||| Sbjct 371456 ATAGCTCAGTTGGTTAGAGCGTGACGCTAATAACGTCAAAGTCGAGGGTTCGAGCCCCTC 371515 Query 136776 TGGGAACAGCTTTT 136789 ||||| || ||||| Sbjct 371516 TGGGACCATCTTTT 371529 >seq66 Length=683700 Score = 84.2 bits (92), Expect = 3e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 136716 ATAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||||||||||||||||||||||| ||| |||||| ||| ||| ||||||||||||| Sbjct 496104 ATAGCTCAGTTGGTTAGAGCGTGACGCTAATAACGTCAAAGTCGAGGGTTCGAGCCCCTC 496045 Query 136776 TGGGAACAGCTTTT 136789 ||||| || ||||| Sbjct 496044 TGGGACCATCTTTT 496031 >seq108 Length=1489596 Score = 82.4 bits (90), Expect = 9e-11 Identities = 72/89 (81%), Gaps = 2/89 (2%) Strand=Plus/Minus Query 136716 ATAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||||||||||||||||||||||| ||| |||||| ||| ||| ||||||||||||| Sbjct 1252144 ATAGCTCAGTTGGTTAGAGCGTGACGCTAATAACGTCAAAGTCGAGGGTTCGAGCCCCTC 1252085 Query 136776 TGGGAACA--GCTTTTAGATATATTTTTT 136802 ||||| || ||||| | | | |||||| Sbjct 1252084 TGGGACCATCTCTTTTTGCTTTCTTTTTT 1252056 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588973717718000