Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001715265.1_202016-08-29] 310 sequences; 36,172,237 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq248 168 8e-37 seq259 98.7 1e-15 seq160 86.0 7e-12 >seq248 Length=549880 Score = 168 bits (186), Expect = 8e-37 Identities = 586/913 (64%), Gaps = 66/913 (7%) Strand=Plus/Minus Query 106457 GGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAA 106516 |||||||| | || || | ||||| ||||| ||||||| | | ||||||| | Sbjct 22835 GGAAGGGCAAGAGAGGCAAGGTTGCAGACAGCAACCTCATCCGGAGCACTGTACTCAATG 22776 Query 106517 ATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTG 106576 || || || || | |||||| || || || || | ||||| ||||| ||||| ||| Sbjct 22775 ATCTCAGTGCAGAGGTTGGAGCTACGGATGGTTCCGAGGTTCTTCTGGTTGCTCTTCTTG 22716 Query 106577 TTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATT 106636 ||||| ||||||||||| |||||| |||| | || ||||| ||||| | || ||||| Sbjct 22715 TTGCAAGCATCCTTGTACAGCATGAAGGGGTTACCAGTCTCGGTCTGAGCCTCCAGAATA 22656 Query 106637 GCCTTCCACA-CATCGGCG----GCTGGTACAATGGCGTTGGCC--------CGTCCCTC 106683 || | ||| | | || | | | |||||| | ||| |||| ||| ||| Sbjct 22655 GCGTACCAGAGCTTCTGAGCCTTGATGGTACGACGGCCACGGCCTTCCTTCTCGTACCTA 22596 Query 106684 C----------GCCT--------------------------CGTACTTTGTGTAGAGGGC 106707 | || | | ||||| ||||||||| Sbjct 22595 CAATACTATTAGCATGAGTTGAGAATACACGAACCAACAAACTTACTTCTCGTAGAGGGC 22536 Query 106708 TTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGA 106767 || ||||| ||||| | || | | || || || | || || ||||| |||| Sbjct 22535 GTCGAACTCGTCACCGTAGACATCAGCCAAGCCAGGGGCTTCGTTGGGGCAGAACAGAGT 22476 Query 106768 CCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAA 106827 ||| | || | ||||||| ||||||||||| || || ||| ||||||||| | || Sbjct 22475 CCAGTCGCCGTTCGCCTCAACACGCTTCATGAACAGATCCGGAGTCCACAGGGCATAGAA 22416 Query 106828 GAGATCTC-TACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCA 106886 ||||| | | | || |||| || | ||| ||||| || | || |||||||| | Sbjct 22415 CAGATCGCGGGCTCTGA-CCTCCTCCTTACCGTGGTTCTTACGGAGGTCCAGGAACTCGA 22357 Query 106887 TGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC------C 106940 || ||||| |||||| |||||||| |||| || | || || ||||| | Sbjct 22356 AGACATCCGAGTGCCAGGGCTCAAGGTAGATGGCAAAAGCACC---GGGACGCTTGTTGC 22300 Query 106941 CAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCAT 107000 || | || | || || | || ||| ||| || || |||||||| |||| || ||| | Sbjct 22299 CACCCTGGTCAACGTATCTGGCAGTGTTGTTGAAAACCCGAAGCATGGGAACAAGACCGT 22240 Query 107001 CTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCA 107060 || ||| || || || | ||| |||| | | | | || | || || Sbjct 22239 TGGAGGTACCGTTGGTGCCACCAATGTAAGATCCGGTAGAGCGGATGCGGTGCACGTTCA 22180 Query 107061 TCCCAATACCCCCAGCCCACTTTGAGAT--TTGCGCACACTCCGTAAGAGTTCCATAGAT 107118 |||||||| || || ||| ||||| | ||||| | | | | | ||| | ||||| Sbjct 22179 GACCAATACCACCGGCGGTCTTGGAGATCATAGCGCA-AGT-CTTCAAAGTGTCGTAGAT 22122 Query 107119 ACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGG 107178 ||||| || ||||||||| || ||| ||||||||| || | ||| || || Sbjct 22121 ACCGTCAATGCTGTCCTCCTTCATGTCGACGAGGAAGCAAGAGGCAAGCTGAGGCTGGGG 22062 Query 107179 TGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGACATCTTGT 107237 |||||||| ||||| || || || | |||||| |||| ||| | ||||||||| || Sbjct 22061 AGTACCAGCGTTGAACAGAGTCGGGGAGGCGTGAGTGAA-GTACTTCTGGGACATCAAGT 22003 Query 107238 CGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAA 107297 ||| ||||| | | | || ||||| |||||||| || | ||| |||||||| | Sbjct 22002 GGTAGGTCTCGATGGCCTTCTCGATGTCACTACCGTGGATACCAACGGCAACACGCATCA 21943 Query 107298 ACATGTATTGGGG 107310 || || ||||| Sbjct 21942 GCAGGTGCTGGGG 21930 >seq259 Length=165088 Score = 98.7 bits (108), Expect = 1e-15 Identities = 150/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 117285 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACC 117344 ||| |||||||| || || || || || || || |||||| || || ||||||||||| Sbjct 127892 GTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTGAGACCAGGCATGAGACC 127951 Query 117345 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 117404 |||||||| | ||| | || | ||| || |||||||||||||||||||| || Sbjct 127952 ACGCTTCTTGAGCCAGAAGATGGAAGCGAAGGAGCCGGAGAAGAAGATACCCTCAACGGC 128011 Query 117405 CGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGT-GTCAAACCATTTCATTG 117463 || || |||| || |||| ||||||| ||| | ||| | | ||| || || | Sbjct 128012 AGCGAAAGCAACGAGACGCTGAGCGAAGG-TCGACTCCCTGTCCTGGATCCACTTAATGG 128070 Query 117464 CCCATTTCGCCTTCTTCTCAATACATGGTAC 117494 |||| | |||||||| |||| || || || Sbjct 128071 CCCAATCGGCCTTCTTGGCAATGCAGGGGAC 128101 >seq160 Length=705468 Score = 86.0 bits (94), Expect = 7e-12 Identities = 159/228 (70%), Gaps = 8/228 (4%) Strand=Plus/Plus Query 9372 GCATCAATCTCATCAATGAAGACAATACATGG--TTGATTTTCGCGGGCGATTTCAAAGA 9429 |||||||| ||||| ||||||| ||| || || | ||||| |||| || | | || | Sbjct 91644 GCATCAATTTCATCGATGAAGATAATGCAGGGCGTCGATTTCCGCG--CGTTGGCGAACA 91701 Query 9430 GATCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTG--CGGCGGA 9487 |||| ||||| | | || ||||| ||||||||||| ||||| | | | | | Sbjct 91702 GATCACGAACTCGGGAAGGACCGACACCGACAAACATCTCGACAAACTCCGAACCACTG- 91760 Query 9488 ACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACC 9547 ||| | || |||||| || |||||||| || |||| ||| || | |||||||| Sbjct 91761 ACACT-GAAGAAGGGCACGCCGGATTCACCAGCCGTGGCCTTGGCAAGTAACGTCTTACC 91819 Query 9548 CGTACCTGGCTTACCCGCGAGGAGGGCACCCCGTGGAATCTTGGCGCC 9595 ||||| || ||||| || | |||||| || || || ||||| || Sbjct 91820 GGTACCCGGAGGACCCGAAAGAATGGCACCACGGGGGATTTTGGCACC 91867 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589978513824400