Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001715265.1_202016-08-29] 310 sequences; 36,172,237 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq259 208 1e-48 seq248 134 3e-26 >seq259 Length=165088 Score = 208 bits (230), Expect = 1e-48 Identities = 355/510 (70%), Gaps = 21/510 (4%) Strand=Plus/Plus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 ||||||||| || || | ||||| |||||||| ||||| ||| ||| |||||| ||| Sbjct 127589 CTGGTAGTCTCCTACCCGCTTCTCGAAGAAGTTGGTCTTACCCGCCAGCGAGATCGACTC 127648 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACC--CGTGTC----AGGCCCATCTGTTC 47952 ||||||| ||||||||||| | ||| || | | ||| ||| ||| | Sbjct 127649 CATGAAGTCGAAGGGGTTGGTGGCGTTGTAGTACTTCTTGTTGCCGAGGGCCA------C 127702 Query 47953 CAGCAGGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTAT 48012 ||||||| | |||||||| |||||||||| | |||| || || ||||||||| | Sbjct 127703 CAGCAGGCGGTCCGCGACAAACTCGATGTACTGACACATCAGCTTGGAGTTCATGCCCAG 127762 Query 48013 GAGGGACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCAC 48072 || | ||||||| ||| | || || ||||||| ||| || ||||| || | | Sbjct 127763 CAGAGCAACGGGCAGAGCGTCAGTCAGGAACTCCTGCTCAATGCCGACGGCCTCGACGAT 127822 Query 48073 AATCTGCTTAACG--CGGGACTCTGAGG-GTTTGTTGCGCAGGTGCTTGGCATAGAGCAT 48129 ||| | | ||| | | ||| || | ||||| |||||| || | |||| Sbjct 127823 AATGTCTTCAACAACCTGTTTGCTGGGGCGGTTGTT---CAGGTG---GGAGAACAGCAG 127876 Query 48130 GCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAG 48189 ||| || ||||| |||||| || ||||| || ||||||| ||||||||||| ||| Sbjct 127877 GCAAGCGAAGTCGGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTGAG 127936 Query 48190 ACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAA 48249 ||||||||||| || | || ||||||||||| || | ||||| ||||| |||||||| Sbjct 127937 ACCAGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAAGCGAAGGAGCCGGAGAAGAA 127996 Query 48250 GATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGA 48309 ||| ||||| || || ||||| || ||| | || |||| | | | | |||| Sbjct 127997 GATACCCTCAACGGCAGCGAAAGCAACGAGACGCTGAGCGAAGGTCGACTCCCTGTCCTG 128056 Query 48310 GATCCAGGAAAGCGCCCAGTCTGCCTTCTT 48339 |||||| || ||||| || |||||||| Sbjct 128057 GATCCACTTAATGGCCCAATCGGCCTTCTT 128086 >seq248 Length=549880 Score = 134 bits (148), Expect = 3e-26 Identities = 301/449 (67%), Gaps = 5/449 (1%) Strand=Plus/Minus Query 213793 TCCAGTCCCCGT-CATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTG 213851 ||||||| |||| | ||| || | || ||||||||| ||||| |||||| || | Sbjct 22476 TCCAGTCGCCGTTCGCCTCA-ACACGCTTCATGAACAGATCCGGAGTCCACAGGGCATAG 22418 Query 213852 AACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCA 213911 ||||| || | || || ||| ||| || ||| || || || || || || || Sbjct 22417 AACAGATCGCGGGCTCTGACCTCCTCCTTACCGTGGTTCTTACGGAGGTCCAGGAACTCG 22358 Query 213912 AAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCG---GCCTCTTGCCG 213968 |||| |||| |||||| ||||| | |||||||||||| || || | || | ||||| Sbjct 22357 AAGACATCCGAGTGCCAGGGCTCAAGGTAGATGGCAAAAGCACCGGGACGCTTGTTGCCA 22298 Query 213969 CCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTG 214028 |||||||| || ||||| ||||||| | || || | ||| || || |||||| Sbjct 22297 CCCTGGTCAACGTATCTGGCAGTGTTGTTGAAAACCCGAAGCATGGGAACAAGACCGTTG 22238 Query 214029 GACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAGGTTGCTCATGGAGAGC 214088 || |||||||| || | || || || |||| | | | | | || | || Sbjct 22237 GAGGTACCGTTGGTGCCACCAATGTAAGATCCGGTAGAGCGGATGCGGTGCACGTTCAGA 22178 Query 214089 CCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCG 214148 || || ||||||||| |||||||||||| ||||| | ||| ||| || ||| ||| Sbjct 22177 CCAATACCACCGGCGGTCTTGGAGATCATAGCGCAAGTCTTCAAAGTGTCGTAGATACCG 22118 Query 214149 GCCATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTGGACGAG 214208 | |||||||| || | | || | | |||||| | ||||| ||| || | Sbjct 22117 TCAATGCTGTCCTCCTTCATGTCGACGAGGAAGCAAGAGGCAAGCTGAGGCTGGGGAGTA 22058 Query 214209 CCAGAGTTGAAAAGCGTGGGGCTGGCATG 214237 |||| |||||| || || ||| ||| || Sbjct 22057 CCAGCGTTGAACAGAGTCGGGGAGGCGTG 22029 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931529190310400