Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001715265.1_202016-08-29] 310 sequences; 36,172,237 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq2 87.8 1e-11 >seq2 Length=1425683 Score = 87.8 bits (96), Expect = 1e-11 Identities = 153/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| |||||||| || || || || || || || || | || ||||| | || || Sbjct 870049 ACGGAGACGGAGCACCAGGTGCAGAGTGCTCTCCTTCTGGATGTTGTAATCGGAGAGCGT 869990 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | |||||| | ||||| ||||| || || ||||| || || || || ||||| || Sbjct 869989 ACGTCCATCTTCCAACTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGAATGCC 869930 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTG-TGTGAAGTTTCAA 480729 ||||| ||||||||||| ||||| ||||| ||||| | | | | | || | Sbjct 869929 CTCCTTATCTTGAATCTTAGTCTTGACGTTATCAATGGTATCCGAGCTCTCCA-CCTCCA 869871 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | ||||| || || ||||| |||||||| ||||| || || Sbjct 869870 GCGTAATCGTCTTGCCGGTAAGAGTCTTCACGAAGATCTG 869831 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268165902595880