Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20niger_20[genbank_20GCA_5F001715265.1_202016-08-29]
310 sequences; 36,172,237 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq248 118 1e-21
seq160 100 3e-16
seq259 98.7 1e-15
>seq248
Length=549880
Score = 118 bits (130), Expect = 1e-21
Identities = 139/188 (74%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 75878 TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGAT 75937
||| | |||||||| | | ||||| |||||||| | || | ||||| |||||||||
Sbjct 22648 TGGTACGCTATTCTGGAGGCTCAGACCGAGACTGGTAACCCCTTCATGCTGTACAAGGAT 22707
Query 75938 GCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGC 75997
||||| ||||||||||| ||||| ||||| | ||||| ||| ||||| || || |||
Sbjct 22708 GCTTGCAACAAGAAGAGCAACCAGAAGAACCTCGGAACCATCCGTAGCTCCAACCTCTGC 22767
Query 75998 ACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAATC 76057
|| || || | ||||||| | | ||||||| ||||| ||||| | || || |
Sbjct 22768 ACTGAGATCATTGAGTACAGTGCTCCGGATGAGGTTGCTGTCTGCAACCTTGCCTCTCTT 22827
Query 76058 GCCCTTCC 76065
||||||||
Sbjct 22828 GCCCTTCC 22835
>seq160
Length=705468
Score = 100 bits (110), Expect = 3e-16
Identities = 161/227 (71%), Gaps = 6/227 (3%)
Strand=Plus/Minus
Query 175276 GGTGCCAAGATCCCCCGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCTC 175335
|||||||| |||||||| || ||| |||| ||||| || ||||| || ||||| |
Sbjct 91867 GGTGCCAAAATCCCCCGTGGTGCCATTCTTTCGGGTCCTCCGGGTACCGGTAAGACGTTA 91808
Query 175336 CTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATTCATCCAGTG-CTCTGCCGCAAA 175394
|| ||| |||| || |||||||| || || ||| || |||| | || | |
Sbjct 91807 CTTGCCAAGGCCACGGCTGGTGAATCCGGCGTGCCCTTCTTC-AGTGTCAGTGGTTCGGA 91749
Query 175395 CTTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATCGC 175454
||||| ||||||||||| ||||| ||| | | ||||| ||||| || | | ||
Sbjct 91748 GTTTGTCGAGATGTTTGTCGGTGTCGGTCCTTCCCGAGTTCGTGATCTGTTCGCCAACG- 91690
Query 175455 CCGCGAAAATCAA--CCATGTATTGTCTTCATTGATGAGATTGATGC 175499
|||| ||||| | || || ||| ||||||| ||||| ||||||||
Sbjct 91689 -CGCGGAAATCGACGCCCTGCATTATCTTCATCGATGAAATTGATGC 91644
>seq259
Length=165088
Score = 98.7 bits (108), Expect = 1e-15
Identities = 150/211 (71%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 65008 GTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTTTGAC-ACAAAGTCTCG 65066
|| || || |||| |||||||| | ||||| || || ||| | | ||| | |||
Sbjct 128101 GTCCCCTGCATTGCCAAGAAGGCCGATTGGGCCATTAAGTGGATCCAGGACAGGGAGTCG 128042
Query 65067 CTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTC 65126
||||||| |||| || |||| || || || |||||||||||||||||||| ||
Sbjct 128041 A-CCTTCGCTCAGCGTCTCGTTGCTTTCGCTGCCGTTGAGGGTATCTTCTTCTCCGGCTC 127983
Query 65127 ATTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAA 65186
||| | || | ||| | |||||||| ||||||||||| || || |||||| ||
Sbjct 127982 CTTCGCTTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTCACCTTCTCCAA 127923
Query 65187 TGAACTTATTTCCCGAGATGAGGGTCTCCAC 65217
|| || || || || || |||||||| |||
Sbjct 127922 CGAGCTCATCTCTCGTGACGAGGGTCTGCAC 127892
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596567288292800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |