Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001715265.1_202016-08-29] 310 sequences; 36,172,237 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq259 167 3e-35 seq160 118 1e-20 seq256 113 6e-19 seq248 109 7e-18 seq254 89.7 6e-12 >seq259 Length=165088 Score = 167 bits (184), Expect = 3e-35 Identities = 182/242 (75%), Gaps = 0/242 (0%) Strand=Plus/Plus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||| ||| || || || ||| |||||| ||||||||||| ||| | ||||||||| Sbjct 127584 GCCTTCTGGTAGTCTCCTACCCGCTTCTCGAAGAAGTTGGTCTTACCCGCCAGCGAGATC 127643 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810 ||||||| | ||| ||||||| | ||||||| ||| | | ||||| | | | Sbjct 127644 GACTCCATGAAGTCGAAGGGGTTGGTGGCGTTGTAGTACTTCTTGTTGCCGAGGGCCACC 127703 Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870 ||||||||||| |||||||||||||||||||| ||||| || || ||||||||| | Sbjct 127704 AGCAGGCGGTCCGCGACAAACTCGATGTACTGACACATCAGCTTGGAGTTCATGCCCAGC 127763 Query 868871 AGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATG 868930 || || || ||||| | || ||| ||||| | ||| || |||||||||||||||| Sbjct 127764 AGAGCAACGGGCAGAGCGTCAGTCAGGAACTCCTGCTCAATGCCGACGGCCTCGACGATA 127823 Query 868931 AT 868932 || Sbjct 127824 AT 127825 Score = 114 bits (126), Expect = 2e-19 Identities = 142/192 (74%), Gaps = 3/192 (2%) Strand=Plus/Plus Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238 ||| ||||| ||| ||| | |||||| |||| ||| || |||||||| || ||||| Sbjct 127898 ACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTGAGACCAGGCATGAGACCACGCTT 127957 Query 869239 CTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 869298 ||||||||| ||||||| ||| ||| ||||| ||||| ||||| ||||| || || Sbjct 127958 CTTGAGCCAGAAGATGGAAGCGAAGGAGCCGGAGAAGAAGATACCCTCAACGGCAGCGAA 128017 Query 869299 GCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGTTGATCCACTTCATCGCCCA 869358 | | ||| |||| || ||| ||||| |||| | | ||||||||| || ||||| Sbjct 128018 AGCAACGAGACGCTGAGCGAAG--GTCGACTCCCT-GTCCTGGATCCACTTAATGGCCCA 128074 Query 869359 GTCGGCCTTTTT 869370 |||||||| || Sbjct 128075 ATCGGCCTTCTT 128086 Score = 113 bits (124), Expect = 6e-19 Identities = 177/251 (71%), Gaps = 3/251 (1%) Strand=Plus/Plus Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGG 869692 |||||||||||||| || ||||||||| ||||| ||| | |||| | || ||| Sbjct 128234 GAGTGGATGTTCTCCATCATGATCTGGAATCCGTAGAAGCAACGAGCCTCAGGAACCTGG 128293 Query 869693 ACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAA 869752 ||||| |||| || || | ||||||||| || ||||| ||| ||| ||||| Sbjct 128294 ACCTCGCCGCTGAAGCGCTCGACAAGGTTCTCGTTGACAATGCCATCGGAGGCAGCGAAG 128353 Query 869753 AAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGA-GCG--ACACCCAGTGG 869809 || || || ||||| ||| |||| ||||||||||||| | | ||| ||||| | Sbjct 128354 AACGCGAGAACGTGGGAGATGAAGTAGCGCTCGTCGTCGTTCAGGCGGTTGTGCCAGTCG 128413 Query 869810 ACGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTG 869869 || | || || | |||||||||||||||| || ||||||||||| ||| Sbjct 128414 TGCAAATCCTTGGACAGATCGATTTCCTCGGCGGTCCAGAAAGAAGCCTCGGCCTTCTTG 128473 Query 869870 TACATCTCCCA 869880 ||||||| ||| Sbjct 128474 TACATCTGCCA 128484 >seq160 Length=705468 Score = 118 bits (130), Expect = 1e-20 Identities = 121/157 (77%), Gaps = 1/157 (1%) Strand=Plus/Plus Query 19047 GACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAG 19106 ||||||||||| || || || || ||||| || ||||| || | || || || ||| Sbjct 346551 GACAGCATCGGTGGTACCGTCACCTGCGTTATCCGTAACGTCCCCGTCGGTCTTGGTGAG 346610 Query 19107 CCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACC 19166 || ||||| |||||| | |||||| |||||||||||||||||| ||||| |||||| Sbjct 346611 CCCTGCTTCGACAAGCTGGAGGCCAAGCTCGCCCACGCCATGCTCAGCATCCCCGCCACC 346670 Query 19167 AAGGGATTCGAGATTGGCAGCGGGTT-TGCGGGTGCG 19202 ||||| |||||||| ||| ||| || |||| |||| Sbjct 346671 AAGGGCTTCGAGATCGGCTCCGGTTTCGGCGGCTGCG 346707 >seq256 Length=692812 Score = 113 bits (124), Expect = 6e-19 Identities = 94/115 (82%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 ||||| |||||||||||||| ||| ||| || || | || ||||| | || || ||| Sbjct 201382 GCCGCAAACTACCTCGACATTAAGGGTCTTCTGGACGTCGGATGCAAAACCGTTGCGAAC 201441 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAGTACG 1592300 ||||||||||||||||| || || ||||||||||||||||| |||||| || ||| Sbjct 201442 ATGATCAAGGGCAAGTCTCCGGAAGAGATCCGCAAGACCTTCAACATCCAGAACG 201496 >seq248 Length=549880 Score = 109 bits (120), Expect = 7e-18 Identities = 204/300 (68%), Gaps = 0/300 (0%) Strand=Plus/Minus Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124 |||||| ||||| | || |||| ||| || || || |||||||| || || |||||||| Sbjct 22295 CTGGTCAACGTATCTGGCAGTGTTGTTGAAAACCCGAAGCATGGGAACAAGACCGTTGGA 22236 Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184 ||||||||||| | | ||| | |||| | ||| | |||| || | || Sbjct 22235 GGTACCGTTGGTGCCACCAATGTAAGATCCGGTAGAGCGGATGCGGTGCACGTTCAGACC 22176 Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244 || || ||||| | ||||||||| | ||||| || | ||||||||||| || || Sbjct 22175 AATACCACCGGCGGTCTTGGAGATCATAGCGCAAGTCTTCAAAGTGTCGTAGATACCGTC 22116 Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304 || ||| |||||||||| ||||| ||||| || | || || || | || || Sbjct 22115 AATGCTGTCCTCCTTCATGTCGACGAGGAAGCAAGAGGCAAGCTGAGGCTGGGGAGTACC 22056 Query 1630305 GGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTAGGT 1630364 |||||||| || || || | || ||||| ||| | | ||||| || |||||| Sbjct 22055 AGCGTTGAACAGAGTCGGGGAGGCGTGAGTGAAGTACTTCTGGGACATCAAGTGGTAGGT 21996 >seq254 Length=176773 Score = 89.7 bits (98), Expect = 6e-12 Identities = 139/196 (71%), Gaps = 7/196 (4%) Strand=Plus/Plus Query 1726961 GACCCGTCGAGGTCGGGGTCGCTGGCCAGGCCCTTCCACCCGACGGTCGTGCGCGGCTTT 1727020 ||| | || | |||||||||| || ||| ||||||||||| || || ||||| ||||| Sbjct 151334 GACTCATCAATGTCGGGGTCGTTGATCAGACCCTTCCACCCCACTGTGGTGCGGGGCTTC 151393 Query 1727021 TCGACATAGGCGCGCATGACCACGCAAAGCGCGTCGCCGACCTCGTCTCGGACAAAGGCG 1727080 |||| ||||| ||||| | || || || ||||| || | ||||||| | || Sbjct 151394 TCGAGGTAGGCACGCATAATAACACAGAGGTCGTCG--GAAAGCTTCTCGGAGA---GCT 151448 Query 1727081 C--GCAGGCGTCGGCCATAGTCGACGACGGCCGCCGGGTCGTGCGCCGAACACGGACCAA 1727138 | ||| || || |||| |||| | | | || |||||||| ||| || ||||| | Sbjct 151449 CCTTCAGACGCTGGGCATATTCGAGGGCCGTGGCAGGGTCGTGGATCGAGCAAGGACCGA 151508 Query 1727139 CGATAACCAGCAGCCG 1727154 | | ||||||||| || Sbjct 151509 CAACAACCAGCAGACG 151524 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107113759948270