Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001715265.1_202016-08-29] 310 sequences; 36,172,237 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq2 123 2e-23 seq45 96.9 2e-15 seq237 89.7 3e-13 >seq2 Length=1425683 Score = 123 bits (136), Expect = 2e-23 Identities = 151/204 (74%), Gaps = 8/204 (4%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||||| |||| ||||| |||||||| ||||| || ||| | || |||| Sbjct 869583 AGGACGAGGTGAAGGGTGGATTCCTTTTGAATGTTGTAGTCAGACAGGGTACGGCCATCC 869524 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| |||||||| ||||||||||| || |||||||| | || | ||||||||||| Sbjct 869523 TCCAGCTGCTTTCCAGCGAAGATCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCC 869464 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941 | || || || || || | ||||| ||| | ||| || |||| ||| || Sbjct 869463 TGAATCTTGGTCTTCAC--AT--TGTCGATGGTGTCAGAAGACTCCACCTCAAGGGTGAT 869408 Query 34942 GGTCTTTCCCGTGAGGGTCTTTAC 34965 ||||||||| || |||||||| || Sbjct 869407 GGTCTTTCCGGTCAGGGTCTTGAC 869384 Score = 102 bits (112), Expect = 5e-17 Identities = 152/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||||||| | |||||||||||||| ||||| || || || || | || |||| Sbjct 870039 AGCACCAGGTGCAGAGTGCTCTCCTTCTGGATGTTGTAATCGGAGAGCGTACGTCCATCT 869980 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 |||| ||||| || |||||||| || || |||||||| | || | |||||||| || Sbjct 869979 TCCAACTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTATC- 869921 Query 34886 TTTATTTTTTGT-TTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944 || | | || || |||||| | || | || | ||| || || | || || || Sbjct 869920 TTGAATCTTAGTCTTGACGTTATCAATGGTATCCGAGCTCTCCACCTCCAGCGTAATCGT 869861 Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||| || || || ||||| || ||||||||||| Sbjct 869860 CTTGCCGGTAAGAGTCTTCACGAAGATCTGCAT 869828 Score = 98.7 bits (108), Expect = 6e-16 Identities = 151/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||||| ||| || ||||| ||||| ||||| || | | | || |||| Sbjct 869811 AGGACAAGGTGAAGAGTGGATTCTTTCTGGATGTTGTAGTCGGACAAGGTACGGCCATCC 869752 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 |||| ||||| || |||||||| || || |||||||| | || | || |||||||| Sbjct 869751 TCCAACTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCTTCCTTGTC- 869693 Query 34886 TTTATTTTTTGT-TTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944 || | | || || || ||| | || | || | || || || | || || || Sbjct 869692 TTGAATCTTGGTCTTAACGTTATCAATTGTGTCGGAAGATTCAACTTCCAATGTGATCGT 869633 Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||||||||||| ||||| || ||||||||||| Sbjct 869632 CTTTCCCGTGAGAGTCTTGACGAAGATCTGCAT 869600 Score = 91.5 bits (100), Expect = 1e-13 Identities = 121/168 (72%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||| ||||| ||||| || |||| |||| ||||| |||||||| ||||| Sbjct 869262 CTCCTTCTGGATGTTGTAGTCACTAAGCGTGCGGCCATCCTCCAGCTGCTTTCCCGCGAA 869203 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 |||||| || |||||||| | || | |||||||| || | || || |||||| Sbjct 869202 GATCAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTATCCTGGATCTTGGTCTTGACGTT 869143 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGT 34953 | || | || ||| |||||| || | ||| |||||||| || || Sbjct 869142 GTCGATGGTATCGCTGGACTCGACCTCGAGGGTGATGGTCTTGCCGGT 869095 >seq45 Length=445819 Score = 96.9 bits (106), Expect = 2e-15 Identities = 130/181 (72%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 34788 CCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGA 34847 ||||||| ||||| ||||| ||| |||| |||| || || ||||| || ||||||| Sbjct 202528 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGA 202469 Query 34848 TCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATG 34907 | || || ||||| || | || | ||||||||||| | || || |||||| Sbjct 202468 TAAGACGCTGCTGATCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGT 202409 Query 34908 CTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAA 34967 | || | || | | |||||| || | ||| |||||||| |||||||||||||| || | Sbjct 202408 CGATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTGAGGGTCTTGACGA 202349 Query 34968 A 34968 | Sbjct 202348 A 202348 >seq237 Length=1094385 Score = 89.7 bits (98), Expect = 3e-13 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||| | |||| ||||||||| ||||| |||||||| || | || | || Sbjct 4200 AGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGGCCGTCC 4259 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 || || ||||| || ||||||||||| || |||||||| | || | ||||||||||| Sbjct 4260 TCGAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTC 4318 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325691569491890