Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001715265.1_202016-08-29] 310 sequences; 36,172,237 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq259 179 4e-40 seq248 140 3e-28 seq216 125 7e-24 seq2 118 1e-21 >seq259 Length=165088 Score = 179 bits (198), Expect = 4e-40 Identities = 345/505 (68%), Gaps = 9/505 (2%) Strand=Plus/Plus Query 120351 CTTGTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTT 120410 || ||| || || || || ||||| || ||||| || || ||| ||| ||| || | Sbjct 127589 CTGGTAGTCTCCTACCCGCTTCTCGAAGAAGTTGGTCTTACCCGCCAGCGAGATCGACTC 127648 Query 120411 CATAAACTCGAACGGGTTGCTCGCGTTAAAGTATTTCGGCTGGCCCAACTGTACGAGCAG 120470 ||| || ||||| |||||| | ||||| |||| ||| | ||| | || ||||| Sbjct 127649 CATGAAGTCGAAGGGGTTGGTGGCGTTGTAGTACTTCTTGTTGCCGAGGGCCACCAGCAG 127708 Query 120471 TCGGTCCGCTACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGCAACGC 120530 |||||||| |||||||| ||||||| ||||| || | |||||||||||||| || Sbjct 127709 GCGGTCCGCGACAAACTCGATGTACTGACACATCAGCTTGGAGTTCATGCCCAGCAGAGC 127768 Query 120531 CACCGGCAACGCCGACGTGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACATGGC 120590 || |||| || || | ||||||| ||||||| | || ||||| || ||| | Sbjct 127769 AACGGGCAGAGCGTCAGTCAGGAACTCCTGCTCAATGCCGACGGCCTCGACGATAATGTC 127828 Query 120591 --GAGCATAGTG-TGGCCGGGCATCTTGTGTTCGATGCGCGTTCGGTAGTACAGGCACGC 120647 | || || | || ||| |||| | | || | | | | |||||| || Sbjct 127829 TTCAACAACCTGTTTGCTGGGGCGGTTGT-TCAGGTGGGAGAACAG-----CAGGCAAGC 127882 Query 120648 AAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGCCGGG 120707 ||||| |||||||| |||||||| || || || ||||||||| || || || || || Sbjct 127883 GAAGTCGGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTGAGACCAGG 127942 Query 120708 CATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAACACGCC 120767 ||||| || | |||||| |||| |||| || ||| ||| || ||||| | || Sbjct 127943 CATGAGACCACGCTTCTTGAGCCAGAAGATGGAAGCGAAGGAGCCGGAGAAGAAGATACC 128002 Query 120768 CTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCTGTCGATCCA 120827 ||| ||| || || || || | |||| || || |||| | | || | |||||| Sbjct 128003 CTCAACGGCAGCGAAAGCAACGAGACGCTGAGCGAAGGTCGACTCCCTGTCCTGGATCCA 128062 Query 120828 CTTCATGGCCCACTCGGCCTTTTTG 120852 ||| |||||||| |||||||| ||| Sbjct 128063 CTTAATGGCCCAATCGGCCTTCTTG 128087 >seq248 Length=549880 Score = 140 bits (154), Expect = 3e-28 Identities = 592/922 (64%), Gaps = 26/922 (3%) Strand=Plus/Minus Query 148053 GACTGGCTCTGGTCAATGAACGCGCCACGGTCAGCGGCCATTTCAATGA--GT-CGCTTT 148109 ||||| ||||||||||||||| |||||||| || ||||| | | || || |||| Sbjct 23603 GACTGAGACTGGTCAATGAACGCACCACGGTCCGCTGCCATCTGCAGGATCGTCCGCT-- 23546 Query 148110 ATCTTCATCTCCCAGGCCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGATG 148169 |||||||| |||||||||||||| |||||| | | ||| ||| | |||| Sbjct 23545 -GGGAGATCTCCCACACCGTCTTGTACAGCGCCTTGATGTCACTGGGGATGTTGGGGATG 23487 Query 148170 CGCTGCACCGAGCCGCGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAGGTTG 148229 ||| || || || | | |||| || | || ||| | ||||| | ||| | Sbjct 23486 TTCTGGACGGAACCACCCTCGGCAATGATGCGGTTCTTCATGTTGTCCGACCACAGGCCG 23427 Query 148230 AGCTCGATCAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACG 148289 || |||| |||||| | | ||| | | || |||||||| ||||| || || | || Sbjct 23426 AGATCGACCAGGTCCTTCAGCAGCCAGGGGTTGACCACCTGGAACTCACCAGCCAAGACA 23367 Query 148290 CGCCGCAGATACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGC 148349 || || || | |||| || | || || || |||||||| |||||| ||||| Sbjct 23366 CGGCGGGAGTAGATGTTGGAGGTGTAAGGCTCGAAGCACTCGTTGAAGCCCAAGATCTGA 23307 Query 148350 GCGGTCGTTGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTT 148409 ||| | || ||||||||| || ||||||| |||||| | ||| | Sbjct 23306 CTGGTACTGGCAGTGGGCATGGGGGCGACCAGCAAGCTGTTGCGGACACCAGTCTGGGCG 23247 Query 148410 ATTTTGCGCTTCAGAGCCGCCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTCG 148469 || ||| ||| ||||| |||||||||||||| | || || || |||||||||| Sbjct 23246 ATCTTGGCCTTGAGAGCAGCCCAGTCCCAGAGGTCAGTGGGAGTGCGGTCCCACATGTCG 23187 Query 148470 TACTGCAGAATGCCGCGGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGCC 148529 ||||| || || || || | || |||||||| | ||| | |||| | || Sbjct 23186 TACTGAAGGATACCCTGGGAGACAGGAGATCCCTCGTAGGTCTCGTAAGTTCCGAACTCC 23127 Query 148530 GCCGCCAGTTCGCAGCTCGC-CTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCT 148588 || || ||| | || || | | | ||| || || |||||| || || | Sbjct 23126 TTGGCGAGATCGGACGAGGCGGTCAAAC-CAGCGTGATAGATGGTCTCGAAGATCTGGAT 23068 Query 148589 GTTGAGCAG---CGCCGCCGACTCGCTTTCGTACGGCATACGCAGCCGCACAAACGCGTC 148645 ||| ||| | ||| | | | | ||| | |||| || || | || || || Sbjct 23067 GTTCAGCTGTCTGGCCTCGGCCGAG---TCGAAGGGCAGGCGGAGAGCGAGGAAAGCATC 23011 Query 148646 GGCAAGGCCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCT 148705 || || || | || |||| ||||||| ||||| | |||||| || Sbjct 23010 AGCCAGACCGTTGACACCCAGCGCAATGGGACGGTGACGGAAGTTGGACTTCTTGGCCTC 22951 Query 148706 CTCGAGCGGATAGTGGTTGCGGTCGATGATCTTG-TCAAGATTGCGCACCACCACCTTTG 148764 | || || |||| |||| ||||||||||||| ||||| || || |||| |||| Sbjct 22950 CGGGACGGGGTAGTAGTTGATGTCGATGATCTTGTTCAAG-TTACGGACCAAGACCTGGA 22892 Query 148765 TAATTCTGCGCAGCAATTCAAAATCGTACTTGTCATCTACGATGCATCG------GT--T 148816 | | | ||| |||| || |||| | | | | | |||||| || Sbjct 22891 CGACCTCGTGGAGCTTGCCAAAGTCATACTCG-CCGCGA-GCAGCATCGACGAAAGTAGG 22834 Query 148817 CACGGCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGAT 148876 | ||| | |||||| || ||||| || || ||||||||| || |||||||| | ||| Sbjct 22833 AAGGGCAAGAGAGGCAAGGTTGCAGACAGCAACCTCATCCGGAGCACTGTACTCAATGAT 22774 Query 148877 CTCGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTT 148936 ||| | ||| || ||| || ||| || | |||||| || |||||||| |||| Sbjct 22773 CTCAGTGCAGAGGTTGGAGCTACGGATGGTTCCGAGGTTCTTCTGGTTGCTCTTCTTGTT 22714 Query 148937 GCACGCGTCCTTGTACAGCATG 148958 ||| || ||||||||||||||| Sbjct 22713 GCAAGCATCCTTGTACAGCATG 22692 >seq216 Length=569298 Score = 125 bits (138), Expect = 7e-24 Identities = 105/129 (81%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 116476 GGCTTCCACGTGCACGAGTTTGGCGACACCAGCAACGGCTGCACCTCCGCCGGCGAACAC 116535 ||||||||||| ||| |||| || |||| || |||||||||||||||||| ||| ||| Sbjct 456352 GGCTTCCACGTCCACCAGTTCGGTGACAACACCAACGGCTGCACCTCCGCTGGCCCTCAC 456293 Query 116536 TTCAACCCCACCGGCCAGGACCACGGCGCGCCCAACGCCGCCGTTCGTCACGTCGGTGAC 116595 ||||||||| |||| || |||||| || ||| | | || || ||||||||||||||| Sbjct 456292 TTCAACCCCTTCGGCAAGACCCACGGTGCTCCCGAGGACGACGAGCGTCACGTCGGTGAC 456233 Query 116596 CTGGGCAAC 116604 || |||||| Sbjct 456232 CTTGGCAAC 456224 >seq2 Length=1425683 Score = 118 bits (130), Expect = 1e-21 Identities = 132/174 (76%), Gaps = 2/174 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||| || | | |||| | | | ||||| |||||||| || Sbjct 869267 GTAGACTCCTTCTGGATGTTGTAGTCACTAAGCGTGCGGCCA-TCCTCCAGCTGCTTTCC 869209 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 |||| | || || ||||||||||||||||||||||| ||||| || |||||| ||| Sbjct 869208 CGCGAAGATCAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTATCCTGGATCTTGGTCTT 869149 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636 || | || | || ||| ||| ||| || |||| ||||| ||| |||||||| Sbjct 869148 GACGTTGTCGATGGTATCGCTGGACTCGACCTCGAGGGTGATGGTCTTGCCGGT 869095 Score = 107 bits (118), Expect = 2e-18 Identities = 144/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 ||||| |||||||| || ||||| ||| || || | | | ||||| | |||||| || Sbjct 869796 GTGGATTCTTTCTGGATGTTGTAGTCGGACAAGGTACGGCCA-TCCTCCAACTGCTTACC 869738 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | ||||| ||||||||||| || ||||||||||||||||| ||||| ||| Sbjct 869737 AGCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCTTCCTTGTCTTGAATCTTGGTCTT 869678 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | |||| ||||||| | || || || | |||| || || || || ||||| Sbjct 869677 AACGTTATCAATTGTGTCGGAAGATTCAACTTCCAATGTGATCGTCTTTCCCGTGAGAGT 869618 Query 133643 TTTTACGAAAATCTGCAT 133660 || ||||| |||||||| Sbjct 869617 CTTGACGAAGATCTGCAT 869600 Score = 93.3 bits (102), Expect = 4e-14 Identities = 138/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 133469 CTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCCGCGT 133527 ||| ||||| || ||||||||| | ||| | | | || || | |||||| || ||| Sbjct 870019 CTCCTTCTGGATGTTGTAATCGGAGAGCGTACGTCCA-TCTTCCAACTGCTTACCAGCGA 869961 Query 133528 AAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCT 133587 | ||||| ||||||||||| || || ||||| ||||| || ||||| ||||| | Sbjct 869960 AGATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTATCTTGAATCTTAGTCTTGACGT 869901 Query 133588 GCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTA 133647 |||| || || | | |||||| || | || | || |||||||| ||||| || | Sbjct 869900 TATCAATGGTATCCGAGCTCTCCACCTCCAGCGTAATCGTCTTGCCGGTAAGAGTCTTCA 869841 Query 133648 CGAAAATCTGCAT 133660 |||| |||||||| Sbjct 869840 CGAAGATCTGCAT 869828 Score = 86.0 bits (94), Expect = 6e-12 Identities = 106/145 (73%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 ||||| |||||||| || ||| | || || ||||||||||| || || ||||| |||||| Sbjct 869526 TCCTCCAGCTGCTTTCCAGCGAAGATCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTG 869467 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || ||||| ||| | | || | ||||| | | |||||| || | ||||| | Sbjct 869466 TCCTGAATCTTGGTCTTCACATTGTCGATGGTGTCAGAAGACTCCACCTCAAGGGTGATG 869407 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGA 133650 || || |||||||| || || |||| Sbjct 869406 GTCTTTCCGGTCAGGGTCTTGACGA 869382 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483418926744400