Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20niger_20[genbank_20GCA_5F001715265.1_202016-08-29]
310 sequences; 36,172,237 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq2 93.3 3e-14
>seq2
Length=1425683
Score = 93.3 bits (102), Expect = 3e-14
Identities = 155/219 (71%), Gaps = 4/219 (2%)
Strand=Plus/Minus
Query 33534 ACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTC 33593
||| | ||||| || ||||||||||| || || ||||||||||||||||| || ||| |
Sbjct 870043 ACGGAGCACCAGGTGCAGAGTGCTCTCCTTCTGGATGTTGTAATCGGAGAGCGTACGTCC 869984
Query 33594 GTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTT 33653
|| ||||| || || || || || || | ||||||||| || | || | || || ||
Sbjct 869983 ATCTTCCAACTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTT 869924
Query 33654 GTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGAT-TCCACGTCAACCGTG 33711
|| ||| || || | || | || | ||| || | | | ||||| || | |||
Sbjct 869923 ATCTTGAATCTT-AGTCTTGACGTTATCAATGGTATC-CGAGCTCTCCACCTCCAGCGTA 869866
Query 33712 ATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
||||| || || || | || || || ||||||||||||
Sbjct 869865 ATCGTCTTGCCGGTAAGAGTCTTCACGAAGATCTGCATA 869827
Score = 84.2 bits (92), Expect = 1e-11
Identities = 143/205 (70%), Gaps = 2/205 (1%)
Strand=Plus/Minus
Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606
|| |||||| ||||| || |||||||| ||||| | || || | || ||||| ||
Sbjct 869802 TGAAGAGTGGATTCTTTCTGGATGTTGTAGTCGGACAAGGTACGGCCATCCTCCAACTGC 869743
Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666
|| || || || || | ||||||||| || | || | ||||| ||||| ||| ||
Sbjct 869742 TTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCTTCCTTGTCTTGAATCTTG 869683
Query 33667 TGTTTCAACATAGTCACG-GTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGT 33725
|| | ||| | ||| |||||| ||||| || || | |||||||| || || ||
Sbjct 869682 -GTCTTAACGTTATCAATTGTGTCGGAAGATTCAACTTCCAATGTGATCGTCTTTCCCGT 869624
Query 33726 TAACGTTTTTACAAAGATCTGCATA 33750
| || || || ||||||||||||
Sbjct 869623 GAGAGTCTTGACGAAGATCTGCATA 869599
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 328702758115200
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |