Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001715265.1_202016-08-29] 310 sequences; 36,172,237 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq2 111 2e-19 seq248 107 2e-18 seq45 100 3e-16 >seq2 Length=1425683 Score = 111 bits (122), Expect = 2e-19 Identities = 144/199 (72%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 |||||||| || |||||||||||||||||||||||||| | ||| | || || Sbjct 869580 ACGAGGTGAAGGGTGGATTCCTTTTGAATGTTGTAGTCAGACAGGGTACGGCCATCCTCC 869521 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 ||||| || || || || |||| ||||||||| || || || ||||| || || || ||| Sbjct 869520 AGCTGCTTTCCAGCGAAGATCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGA 869461 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || || || ||| | ||||| || || ||||| || || || ||||| || Sbjct 869460 ATCTTGGTCTTCACATTGTCGATGGTGTCAGAAGACTCCACCTCAAGGGTGATGGTCTTT 869401 Query 134685 CCGGTTAAAGTTTTAACGA 134703 ||||| | || || |||| Sbjct 869400 CCGGTCAGGGTCTTGACGA 869382 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | || ||||| || |||||||| || || |||||||||||| Sbjct 869826 CCACCACGGAGACGAAGGACAAGGTGAAGAGTGGATTCTTTCTGGATGTTGTAGTCGGAC 869767 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | || || | ||| || || || || || | ||||||||| || || || Sbjct 869766 AAGGTACGGCCATCCTCCAACTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGG 869707 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 |||||||| || |||||||| || || || || | ||||||||| ||||| || Sbjct 869706 ATGCCTTCCTTGTCTTGAATCTTGGTCTTAACGTTATCAATTGTGTCGGAAGATTCAACT 869647 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | || || || || || || | ||| || ||||| || ||||| Sbjct 869646 TCCAATGTGATCGTCTTTCCCGTGAGAGTCTTGACGAAGATCTGCAT 869600 Score = 89.7 bits (98), Expect = 5e-13 Identities = 132/187 (71%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 || || || || || || ||||| || ||||||||||| | || ||| | || || Sbjct 869279 ACAAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCACTAAGCGTGCGGCCATCCTCC 869220 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 ||||| || || || || |||| ||||||||| ||||| || ||||| || || || || Sbjct 869219 AGCTGCTTTCCCGCGAAGATCAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTATCCTGG 869160 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || ||||| ||| | || ||| || || || ||||| || ||||| || Sbjct 869159 ATCTTGGTCTTGACGTTGTCGATGGTATCGCTGGACTCGACCTCGAGGGTGATGGTCTTG 869100 Query 134685 CCGGTTA 134691 ||||||| Sbjct 869099 CCGGTTA 869093 >seq248 Length=549880 Score = 107 bits (118), Expect = 2e-18 Identities = 339/525 (65%), Gaps = 3/525 (1%) Strand=Plus/Plus Query 7564 CAACACATGCTGTTGCGCGTGGCGGTGGGCATTCACGGCGAAGACATTGACGCCGCCTTG 7623 || ||| ||||| |||| || || || || || ||||| ||||| || ||| | Sbjct 21933 CAGCACCTGCTGATGCGTGTTGCCGTTGGTATCCACGGTAGTGACATCGAGAAGGCCATC 21992 Query 7624 GAAACGTACCAAATGATGTCTTTGAAACAGTTTACGCACGCTTCGCCCACCATGTTTGCC 7683 || || ||||| ||||||| ||| | || || ||||| || || || |||| | Sbjct 21993 GAGACCTACCACTTGATGTCCCAGAAGTACTTCACTCACGCCTCCCCGACTCTGTTCAAC 22052 Query 7684 GCGGGCACAAACGCGCCTCAATTGTCCTCGTGTTTTTTGCTAACCATGCGCGAAGACAGC 7743 || || || | |||||| | |||| || || | | |||| || |||||| Sbjct 22053 GCTGGTACTCCCCAGCCTCAGCTTGCCTCTTGCTTCCTCGTCGACATGAAGGAGGACAGC 22112 Query 7744 ATCGACGGCATTTACAACACGCTGCGCGATTGCGCCAATATTTCCAAATACGGCGGCGGA 7803 || ||||| || ||| |||| || |||||| | || ||||| || ||| || Sbjct 22113 ATTGACGGTATCTACGACACTTTGAAGACTTGCGCTATGATCTCCAAGACCGCCGGTGGT 22172 Query 7804 ATAGGTCTGAACGTAAACGACGTGCGCGCCAACGGTAGCCGCATCGTGTCCACCAACGGA 7863 || ||||||||||| || | | ||| | | ||| ||| | ||||||||| Sbjct 22173 ATTGGTCTGAACGTGCACCGCATCCGCTCTACCGGATCTTACATTGGTGGCACCAACGGT 22232 Query 7864 AAAGCCAGCGGTTTAGAGCCCATGTTGCGCGTGTTCAATAACGCGGTGCGACATGTAGAC 7923 | ||| |||| | | |||||| | || || ||||| ||| | | || | || ||| Sbjct 22233 ACCTCCAACGGTCTTGTTCCCATGCTTCGGGTTTTCAACAACACTGCCAGATACGTTGAC 22292 Query 7924 CAGGGGGG---AAAGCGCAAAGGCGCCGCTGCCATCTATTTGGAGCCGTGGCACGCGGAC 7980 ||||| || ||||| || || ||||||||| | ||||| |||||| |||| Sbjct 22293 CAGGGTGGCAACAAGCGTCCCGGTGCTTTTGCCATCTACCTTGAGCCCTGGCACTCGGAT 22352 Query 7981 ATTTACGCAGTGCTAAATCTGCGTCGCAACATGGGTTGCGAAGACAGCAAAGCGCGCGAT 8040 | | || | || | || ||| ||| ||| || || || ||| |||||| Sbjct 22353 GTCTTCGAGTTCCTGGACCTCCGTAAGAACCACGGTAAGGAGGAGGTCAGAGCCCGCGAT 22412 Query 8041 CTATTCTTCGGATTGTGGGTGCCCGATCTGTTTATGAGGCGCGTT 8085 || |||| | ||||| || |||||||| |||| ||| ||| Sbjct 22413 CTGTTCTATGCCCTGTGGACTCCGGATCTGTTCATGAAGCGTGTT 22457 >seq45 Length=445819 Score = 100 bits (110), Expect = 3e-16 Identities = 133/185 (72%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 134521 ATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAA 134580 || |||| || ||||||||||||| | |||| | || || ||||| || || || | Sbjct 202531 ATACCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGA 202472 Query 134581 AAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCG 134640 | || | |||||||||||| || || || || || || || || || || ||||| Sbjct 202471 AGATAAGACGCTGCTGATCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGTCTTGACGT 202412 Query 134641 CGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAA 134700 ||| | |||||| ||| || |||||||| |||||||| ||||| || | || || | Sbjct 202411 TGTCGATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTGAGGGTCTTGA 202352 Query 134701 CGAAA 134705 ||||| Sbjct 202351 CGAAA 202347 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505396441581200