Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001715265.1_202016-08-29] 310 sequences; 36,172,237 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq259 134 2e-26 seq248 129 7e-25 seq160 82.4 9e-11 >seq259 Length=165088 Score = 134 bits (148), Expect = 2e-26 Identities = 158/211 (75%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 130027 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 130086 ||| |||||||||||||| |||||||| || || |||||| ||||| ||||||||||| Sbjct 127892 GTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTGAGACCAGGCATGAGACC 127951 Query 130087 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 130146 |||||||| | |||||| || | | || ||||| ||||||||||| ||||| || Sbjct 127952 ACGCTTCTTGAGCCAGAAGATGGAAGCGAAGGAGCCGGAGAAGAAGATACCCTCAACGGC 128011 Query 130147 CGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGT-ATCAAACCACTTCATCG 130205 ||||| |||| |||||||| ||| |||| || | ||| | | |||||| || | Sbjct 128012 AGCGAAAGCAACGAGACGCTGAGCGAAGG-TCGACTCCCTGTCCTGGATCCACTTAATGG 128070 Query 130206 CCCACTGCGCCTTTTTCTCGATACACGGGAC 130236 |||| | ||||| || | || || ||||| Sbjct 128071 CCCAATCGGCCTTCTTGGCAATGCAGGGGAC 128101 >seq248 Length=549880 Score = 129 bits (142), Expect = 7e-25 Identities = 367/561 (65%), Gaps = 5/561 (1%) Strand=Plus/Minus Query 118938 TACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTA 118997 ||||| ||||||||| || ||||| ||||| | | || | | || || || | Sbjct 22552 TACTTCTCGTAGAGGGCGTCGAACTCGTCACCGTAGACATCAGCCAAGCCAGGGGCTTCG 22493 Query 118998 TCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGG 119057 | |||||||| |||| ||| | || | ||||||| ||||||||||| || || || Sbjct 22492 TTGGGGCAGAACAGAGTCCAGTCGCCGTTCGCCTCAACACGCTTCATGAACAGATCCGGA 22433 Query 119058 ATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGC 119117 |||| || || |||| ||||| || | | || || | || || || ||| Sbjct 22432 GTCCACAGGGCATAGAACAGATCGCGGGCTCTGACCTCCTCCTTACCGTGGTTCTTACGG 22373 Query 119118 AACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCC 119177 | |||| || || | || ||||| |||||| || || ||||| | || | | || Sbjct 22372 AGGTCCAGGAACTCGAAGACATCCGAGTGCCAGGGCTCAAGGTAGATGGCAAAAGCACCG 22313 Query 119178 TTACGACGA---CCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATT 119234 ||| ||| |||||| || || || |||||| ||| || || |||||||| Sbjct 22312 GGACGCTTGTTGCCACCCTGGTCAACGTATCTGGCAGTGTTGTTGAAAACCCGAAGCATG 22253 Query 119235 GGAATGATACCATCGGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACA 119294 |||| | ||| | ||| || || || || | ||| ||| | | | || Sbjct 22252 GGAACAAGACCGTTGGAGGTACCGTTGGTGCCACCAATGTAAGATCCGGTAGAGCGGATG 22193 Query 119295 TCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGA 119354 ||| | || || ||||||||| || || ||| ||||| ||||| | | | | Sbjct 22192 CGGTGCACGTTCAGACCAATACCACCGGCGGTCTTGGAGATCATAGCGCAAGTCTTCAAA 22133 Query 119355 CTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATT 119414 || ||||||| || || || ||| |||| | ||| ||||||||| | | Sbjct 22132 GTGTCGTAGATACCGTCAATGCTGTCCTCCTTCATGTCGACGAGGAAGCAAGAGGCAAGC 22073 Query 119415 TGAGGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCT-TG 119473 |||||| ||| |||||||||||||| ||||| || | ||||| |||| ||| | || Sbjct 22072 TGAGGCTGGGGAGTACCAGCGTTGAACAGAGTCGGGGAGGCGTGAGTGAA-GTACTTCTG 22014 Query 119474 GGACATCTTGTCGTAGGTCTC 119494 ||||||| || ||||||||| Sbjct 22013 GGACATCAAGTGGTAGGTCTC 21993 Score = 111 bits (122), Expect = 2e-19 Identities = 459/719 (64%), Gaps = 14/719 (2%) Strand=Plus/Minus Query 118182 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 118241 ||||| |||| ||||| ||||| |||||||| ||| |||||||| || || | Sbjct 23357 TAGATGTTGGAGGTGTAAGGCTCGAAGCACTCGTTGAAGCCCAAGATCTGACTGGTACTG 23298 Query 118242 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCC 118301 || ||||||||||| || | || | |||||| |||| ||| | | || || Sbjct 23297 GCAGTGGGCATGGGGGCGACCAGCAAGCTGTTGCGGACACCAGTCTGGGCGATCTTGGCC 23238 Query 118302 TTGAGAGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGG 118361 |||||||| ||||||| || | | | | | |||||| || |||| ||| Sbjct 23237 TTGAGAGCAGCCCAGTCCCAGAGGTCAGTGGGAGTGCGGTCCCACATGTCGTACTGAAGG 23178 Query 118362 ATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAAT 118421 ||||| ||||| | || |||||||| | ||||| || | || ||| || | Sbjct 23177 ATACCCTGGGAGACAGGAGATCCCTCGTAGGTCTCGTAAGTTCCGAACTCCTTGGCGAGA 23118 Query 118422 TCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCAT-TGC 118480 ||||| || | | |||||||| || || || || || | |||| || Sbjct 23117 TCGGACGAGGCGGTCAAACCAGCGTGATAGATGGTCTCGAAGATCTGGATGTTCAGCTGT 23058 Query 118481 CTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTG 118540 || ||||||| | || || || | || ||| | || |||| || ||||| | Sbjct 23057 CT-GGCCTCGGCCGAGTCGAAGGGCAGGCGGAGAGCGAGGAAAGCATCAGCCAGACCGTT 22999 Query 118541 GACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCC---ACGGG 118597 |||||| || |||| || || || | | || |||||| || |||| ||||| Sbjct 22998 GACACCCAGCGCAATGGGACGGTGACGGAAGTTGGACTTCTTGGC---CTCCGGGACGGG 22942 Query 118598 ATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATG 118657 || | || | ||||| | | | || | || | | |||| || || || Sbjct 22941 GTAGTAGTTGATGTCGATGATCTTGTTCAAGTTACGGACCAAGACCTGGACGACCTCGTG 22882 Query 118658 AAGCTTTTCGTAATCAAAA---CTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGAT 118714 ||||| | | ||| | | ||||| | ||| ||| | |||||||||| | Sbjct 22881 GAGCTTGCCAAAGTCATACTCGCCGCGAG---CAGCATCGACGAAAGTAGGAAGGGCAAG 22825 Query 118715 TGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCA 118774 || || || || || |||| ||||||| | || ||||||| || || || ||||| Sbjct 22824 AGAGGCAAGGTTGCAGACAGCAACCTCATCCGGAGCACTGTACTCAATGATCTCAGTGCA 22765 Query 118775 CAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATC 118834 | ||| || || ||||| || | |||||| || || ||| |||| || ||||| Sbjct 22764 GAGGTTGGAGCTACGGATGGTTCCGAGGTTCTTCTGGTTGCTCTTCTTGTTGCAAGCATC 22705 Query 118835 CTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA 118893 |||||| |||||| | || | || ||||| || || | || |||||||| | ||||| Sbjct 22704 CTTGTACAGCATGAAGGGGTTACCAGTCTCGGTCTGAGCCTCCAGAATAGCGTACCAGA 22646 >seq160 Length=705468 Score = 82.4 bits (90), Expect = 9e-11 Identities = 165/239 (69%), Gaps = 12/239 (5%) Strand=Plus/Plus Query 14234 TTACCGACGGCGTCAATTTCATCGATGAAAACGATACATGG--TTGATTTTCACGGGCAA 14291 ||||||| || ||||||||||||||||| | || || || | ||||| | || | Sbjct 91635 TTACCGATAGCATCAATTTCATCGATGAAGATAATGCAGGGCGTCGATTTCCGCGCG--- 91691 Query 14292 CTT--CAAAGATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATT 14349 || | || | ||| || |||| | ||||||||| ||||||||||| ||||| | Sbjct 91692 -TTGGCGAACAGATCACGAACTCGGGAAGGACCGACACCGACAAACATCTCGACAAACTC 91750 Query 14350 GG--CGGCGGAACATTGGATGAAGGGGACGTTAGATTCACCCGCGATGGCTCGGGCGAGG 14407 | | | | ||| | || |||||| ||| |||||||| || |||| ||| || Sbjct 91751 CGAACCACTG-ACACT-GAAGAAGGGCACGCCGGATTCACCAGCCGTGGCCTTGGCAAGT 91808 Query 14408 AGGGTCTTCCCCGTCCCTGGTTTCCCTGCGAGAAGGGCACCACGTGGGATCCTGGCACC 14466 | ||||| || || || || || | |||| ||||||||| ||||| ||||||| Sbjct 91809 AACGTCTTACCGGTACCCGGAGGACCCGAAAGAATGGCACCACGGGGGATTTTGGCACC 91867 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618432803563600