Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001715265.1_202016-08-29] 310 sequences; 36,172,237 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq182 203 1e-46 seq2 147 7e-30 seq109 143 8e-29 seq237 91.5 4e-13 >seq182 Length=518127 Score = 203 bits (224), Expect = 1e-46 Identities = 592/906 (65%), Gaps = 13/906 (1%) Strand=Plus/Plus Query 349197 CCGCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATC 349256 ||||| | || |||||||| || || || || || ||||| | ||| | | |||| | Sbjct 175535 CCGCTGTTGGTATCGATTTGGGAACCACCTACTCCTGTGTGGGTGTCTTCCGTGATGACC 175594 Query 349257 GTGTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTA 349316 | | ||||| || || || || || |||||| | || || || || | ||| || || | Sbjct 175595 GCATTGAAATCATCGCCAACGACCAGGGTAACCGCACTACCCCCTCTTTCGTGGCTTTCA 175654 Query 349317 CCGAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAA 349376 |||| || |||||| | || |||||| | || || || || | || || || | | Sbjct 175655 CCGACACCGAGCGTCTCATCGGTGATGCCGCCAAGAACCAGGTCGCCATGAACCCTCACA 175714 Query 349377 ATACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGAC----AAATCTACA 349432 | || || || ||||||||||| || || ||| | ||||| | ||| | || Sbjct 175715 ACACCGTCTTCGATGCTAAGCGTCTGATCGGTCGTCGTTTTGCCGACGCTGAGGTC---- 175770 Query 349433 CAATCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATT 349492 || ||||| | || || | || || | ||||| | | ||| |||| || || || Sbjct 175771 CAGTCTGACATGAAGCACTGGCCCTTCAAGGTTGT-CGAGAAG--GGTGGCAAGCCCATC 175827 Query 349493 ATTGAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATG 349552 | |||||||| | || || || || || || ||||| || | || || ||| Sbjct 175828 GTCGAGGTTGAGTTCAAGGGCGAGACCAAGCAGTTCACCCCCGAGGAGGTCTCCTCCATG 175887 Query 349553 GTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCT 349612 | | || ||| || | ||||| || || | |||| || || | | ||| Sbjct 175888 ATCCTCACCAAGATGCGTGAGACCGCTGAGGCCTACCTCGGTGGCACCGTCAACAACGCT 175947 Query 349613 GTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGC 349672 || || ||||| || ||||| || || || | |||||| || || || |||||||| Sbjct 175948 GTCATCACTGTCCCCGCCTACTTCAACGACTCTCAGCGTCAGGCCACCAAGGATGCTGGT 176007 Query 349673 AGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCA 349732 |||||| || | || ||||| | || || || || ||||| ||||| || ||||| Sbjct 176008 CTCATTGCCGGCCTGAACGTTCTCCGTATCATCAACGAGCCCACCGCTGCTGCCATTGCC 176067 Query 349733 TATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGT 349792 || || || || || | | || || || | || || || ||| | |||||| Sbjct 176068 TACGGTCTGGACAAGAAGGCCGAGGGTGAGCGCAACGTCCTCATCTTCGATCTTGGTGGT 176127 Query 349793 GGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACT 349852 ||||| || ||||| || || || || | || ||||| || || || || || || || Sbjct 176128 GGTACCTTCGATGTCTCCCTCCTGACCATCGAGGAGGGTATCTTCGAGGTCAAGGCCACC 176187 Query 349853 GCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTT 349912 |||||||| || || | ||||| || || || || || || ||||| || || || Sbjct 176188 GCTGGTGACACTCACTTGGGTGGTGAGGACTTCGACAACCGCCTCGTCAACCACTTCGTC 176247 Query 349913 AAAGAATTTAAGCGTCAAGC-TAAAATTGATATTGGAGATAATCCTAGAGCAATGCGTCG 349971 || || || ||||| ||||| || | || | || || | || | ||||| Sbjct 176248 AACGAGTTCAAGCG-CAAGCACAAGAAGGACCTCACCTCCAACGCTCGTGCTCTCCGTCG 176306 Query 349972 CCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCTAT 350031 || | || || || || ||||| |||||| || | || || || |||| ||||| || Sbjct 176307 TCTCCGCACCGCTTGCGAGCGTGCCAAGCGTACCCTCTCTTCCGCTGCCCAGACCTCCAT 176366 Query 350032 TGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGGTT 350091 ||| || || ||||| || || | || |||| | || || || |||||||| || Sbjct 176367 TGAGATCGACTCTCTCTTCGAGGGTATCGACTTCTACACCTCCATCACCCGTGCTCGTTT 176426 Query 350092 TGAAGA 350097 || || Sbjct 176427 CGAGGA 176432 >seq2 Length=1425683 Score = 147 bits (162), Expect = 7e-30 Identities = 171/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || ||||| |||||||| || ||||| || || || || || Sbjct 869830 CATACCACCACGGAGACGAAGGACAAGGTGAAGAGTGGATTCTTTCTGGATGTTGTAGTC 869771 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || || || || ||||| || | || || ||||| ||||| ||||| ||||| || || Sbjct 869770 GGACAAGGTACGGCCATCCTCCAACTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGG 869711 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 || || ||||| || || ||||| || | || || |||||||| | || || | ||| Sbjct 869710 GGGGATGCCTTCCTTGTCTTGAATCTTGGTCTTAACGTTATCAATTGTGTCGGAAGATTC 869651 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 |||||| | ||| | |||||||| || || || || || || |||||||| Sbjct 869650 AACTTCCAATGTGATCGTCTTTCCCGTGAGAGTCTTGACGAAGATCTGCAT 869600 Score = 138 bits (152), Expect = 3e-27 Identities = 162/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || || || ||||| || || || |||||||| || || || Sbjct 869602 CATACCACCACGCAGACGAAGGACGAGGTGAAGGGTGGATTCCTTTTGAATGTTGTAGTC 869543 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 ||| | || || ||||| || || || |||||||| ||||| ||||| ||||| || || Sbjct 869542 AGACAGGGTACGGCCATCCTCCAGCTGCTTTCCAGCGAAGATCAGACGCTGCTGGTCCGG 869483 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 ||||| || || || |||||||| || | || ||||| || || | ||||| | || Sbjct 869482 GGGAATGCCCTCCTTGTCCTGAATCTTGGTCTTCACATTGTCGATGGTGTCAGAAGACTC 869423 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTAC 140725 || ||||| || | ||||||||||| || || || || Sbjct 869422 CACCTCAAGGGTGATGGTCTTTCCGGTCAGGGTCTTGAC 869384 Score = 114 bits (126), Expect = 4e-20 Identities = 153/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || |||||||| ||||||||||| || || || || || || Sbjct 869301 CATACCACCACGCAGGCGGAGGACAAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTC 869242 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 | | || || ||||| || || || ||||| || ||||| ||||| ||||| || || Sbjct 869241 ACTAAGCGTGCGGCCATCCTCCAGCTGCTTTCCCGCGAAGATCAGACGCTGCTGGTCGGG 869182 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGG-TT 140685 ||| || || || |||||||| || || | || || || || || | ||| | ||| | Sbjct 869181 AGGGATGCCCTCCTTATCCTGGATCTTGGTCTTGACGTTGTCGATGGTATC-GCTGGACT 869123 Query 140686 CAACTTCAAGTGTAACTGTCTTTCCGGTTA 140715 | || || || || | ||||| ||||||| Sbjct 869122 CGACCTCGAGGGTGATGGTCTTGCCGGTTA 869093 >seq109 Length=1299277 Score = 143 bits (158), Expect = 8e-29 Identities = 336/497 (68%), Gaps = 15/497 (3%) Strand=Plus/Minus Query 349610 GCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCT 349669 || || || || || || || ||||| || || |||||| || || || |||||| Sbjct 1267493 GCAGTCATCACCGTGCCCGCTTATTTCAACGACAACCAGCGCCAGGCTACTAAGGATGCT 1267434 Query 349670 GGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATT 349729 || |||||| || | || || || | || || || || |||||||| ||||||||| Sbjct 1267433 GGTGCCATTGCTGGTCTCAACGTGCTCCGTATCATCAACGAGCCCACTGCAGCAGCAATT 1267374 Query 349730 GCATATGGGCTTGATAAA---ATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTA 349786 || ||||| |||| | | ||| | || || ||||||| | ||| | Sbjct 1267373 GCTTATGGCCTTGGCTCCGGCAAGTCTGATAAGGAGCGTAACGTTCTTATCTACGATCTT 1267314 Query 349787 GGTGGTGGTACTTTTGATGTATCACTACT-AACACTTGAAGAGGGAATTTTTGAAGTTAA 349845 |||||||||||||| ||||| || || || |||| | ||| || | || ||||| Sbjct 1267313 GGTGGTGGTACTTTCGATGTGTCTCTCCTTAACA-TCCAAGGTGGTGTCTTCACTGTTAA 1267255 Query 349846 AGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCA 349905 || ||||| || ||||| || ||||||||| |||| ||||||| ||| | || Sbjct 1267254 GGCTACTGCCGGAGATACCCACCTTGGTGGACAAGACTTTGATACCAACCTCCTGGACCA 1267195 Query 349906 TTTTGTTAAAGAATTTAAGCGTCAAG-CTAAAATTGATAT---TGGAGATAATCCTAGAG 349961 || || || || |||| |||| || | || | |||||| | |||| Sbjct 1267194 CTTCAAGAAGGAGTTCCAGCG-CAAGACTGGCAAGGACCTCTCTGGAGACG---CGAGAG 1267139 Query 349962 CAATGCGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCC 350021 | | |||||||| ||||| || || || |||||||||||| | || || |||||| Sbjct 1267138 CCCTCCGTCGCCTCAGAACCGCTTGCGAGCGTGCTAAGCGTACTTTGTCCAACGCTACCC 1267079 Query 350022 AAACCTCTATTGAAATTGATTCTCTTGCT-GATGGCAAAGATTTCTTTTCATCTATTACA 350080 | || || | ||||| || ||| ||| | |||||| | || ||| ||| || || || Sbjct 1267078 AGACTACTGTGGAAATCGACTCT-TTGTTCGATGGCGAGGACTTCAATTCCTCCATCACC 1267020 Query 350081 CGTGCTCGGTTTGAAGA 350097 |||||||| |||||||| Sbjct 1267019 CGTGCTCGCTTTGAAGA 1267003 >seq237 Length=1094385 Score = 91.5 bits (100), Expect = 4e-13 Identities = 82/103 (80%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 377494 ACACCAGCAAAGTGGAAAGTATTAAGAGTTAATTGAGTAGTGGGCTCACCAATTGACTGC 377553 |||||||||||||||||||| || || || | || || | ||||||||||| ||||| Sbjct 767907 ACACCAGCAAAGTGGAAAGTGTTGAGTGTCATCTGCGTGGCAGGCTCACCAATAGACTGA 767848 Query 377554 GCTGCAATAACGCCAACCATTTCTCCAGGATTGACAATAGCCT 377596 || |||| || ||||||||||| ||||| ||| || ||||| Sbjct 767847 GCAGCAAGCACACCAACCATTTCACCAGGGTTGGCACCAGCCT 767805 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515248381598930