Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001715265.1_202016-08-29] 310 sequences; 36,172,237 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq2 190 2e-43 seq259 141 1e-28 seq45 123 3e-23 seq237 104 3e-17 seq248 89.7 6e-13 >seq2 Length=1425683 Score = 190 bits (210), Expect = 2e-43 Identities = 171/215 (80%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 27418 GTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCA 27477 |||||||| || ||||| ||||| || || |||||||| ||||| ||| | ||| | Sbjct 869384 GTCAAGACCCTGACCGGAAAGACCATCACCCTTGAGGTGGAGTCTTCTGACACCATCGAC 869443 Query 27478 AATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATT 27537 ||| ||||| | || ||||||||||||||||| ||||| || |||||||||||||| || Sbjct 869444 AATGTGAAGACCAAGATTCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGTCTGATC 869503 Query 27538 TTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAA 27597 || ||||| ||||| || ||||||| |||||||| | ||||| || | ||||||||| Sbjct 869504 TTCGCTGGAAAGCAGCTGGAGGATGGCCGTACCCTGTCTGACTACAACATTCAAAAGGAA 869563 Query 27598 TCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 ||||| ||||| || ||| | ||||| || ||||| Sbjct 869564 TCCACCCTTCACCTCGTCCTTCGTCTGCGTGGTGG 869598 Score = 158 bits (174), Expect = 1e-33 Identities = 174/230 (76%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || ||||| |||||||||||||| ||||| || ||||| ||| || | Sbjct 869828 ATGCAGATCTTCGTGAAGACTCTTACCGGCAAGACGATTACGCTGGAGGTGGAG--AGCT 869885 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 |||| ||||| || | ||| |||| ||||| || |||||||| ||||| || |||| Sbjct 869886 CGGATACCATTGATAACGTCAAGACTAAGATTCAAGATAAGGAGGGCATTCCCCCGGACC 869945 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 |||||||||| || || ||||||||||| | || |||| ||||| || | || || | Sbjct 869946 AGCAGCGTCTCATCTTCGCTGGTAAGCAGTTGGAAGATGGACGTACGCTCTCCGATTACA 870005 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 | |||| ||||| |||||| || || || | ||||| || || ||| Sbjct 870006 ACATCCAGAAGGAGAGCACTCTGCACCTGGTGCTCCGTCTCCGTGGCGGA 870055 Score = 152 bits (168), Expect = 6e-32 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| || || || ||||| || || | || ||||| || Sbjct 869600 ATGCAGATCTTCGTCAAGACTCTCACGGGAAAGACGATCACATTGGAAGTTGAATCTTCC 869659 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| || | ||| | || ||||| |||||||| || || || || |||||| Sbjct 869660 GACACAATTGATAACGTTAAGACCAAGATTCAAGACAAGGAAGGCATCCCCCCGGACCAG 869719 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || || ||||||||||| | ||||||| |||||| | | ||||| || Sbjct 869720 CAGCGTCTCATCTTCGCTGGTAAGCAGTTGGAGGATGGCCGTACCTTGTCCGACTACAAC 869779 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| || |||||||||||||| || ||| | ||||| || ||||| Sbjct 869780 ATCCAGAAAGAATCCACTCTTCACCTTGTCCTTCGTCTCCGTGGTGG 869826 Score = 136 bits (150), Expect = 5e-27 Identities = 152/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489 ||||||||||| || || || ||||| ||||| | |||| ||| | || | ||| | Sbjct 869095 ACCGGCAAGACCATCACCCTCGAGGTCGAGTCCAGCGATACCATCGACAACGTCAAGACC 869154 Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549 || || ||||| |||||||| || ||||| |||||||||||||| || || || || ||| Sbjct 869155 AAGATCCAGGATAAGGAGGGCATCCCTCCCGACCAGCAGCGTCTGATCTTCGCGGGAAAG 869214 Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609 || || ||||||| || || || ||||| || |||| ||||| || ||||| ||| Sbjct 869215 CAGCTGGAGGATGGCCGCACGCTTAGTGACTACAACATCCAGAAGGAGTCTACTCTCCAT 869274 Query 27610 CTAGTCTTGCGTCTTCGCGGTGG 27632 || ||| | || || || ||||| Sbjct 869275 CTTGTCCTCCGCCTGCGTGGTGG 869297 >seq259 Length=165088 Score = 141 bits (156), Expect = 1e-28 Identities = 336/501 (67%), Gaps = 15/501 (3%) Strand=Plus/Minus Query 64663 AAAAAGGCTGAATGGGCCATCCGGTGGAT---GAATCGTGGGTCGTCGTTTGGTCAGCGT 64719 || ||||| || |||||||| |||||| | | | | |||| | || | ||||||| Sbjct 128086 AAGAAGGCCGATTGGGCCATTAAGTGGATCCAGGACAGGGAGTCGACCTTCGCTCAGCGT 128027 Query 64720 CTCGCAGCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTATTTTC 64779 |||| ||||| || || || || || ||||| || || || ||| ||| || ||| Sbjct 128026 CTCGTTGCTTTCGCTGCCGTTGAGGGTATCTTCTTCTCCGGCTCCTTCGCTTCCATCTTC 127967 Query 64780 TGGCTAAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCTCTCGG 64839 ||||| || ||||| || || ||||| ||||| | || || |||||||| |||||||| Sbjct 127966 TGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTCACCTTCTCCAACGAGCTCATCTCTCGT 127907 Query 64840 GACGAGGGGCTCCACCAAGAATTTGCGGTTACC--CTGTTCAGCCACCTCAAGGA-CAAA 64896 |||||||| || ||| || || || || || |||||| |||||| || | | Sbjct 127906 GACGAGGGTCTGCACACCGACTT--CGCTTGCCTGCTGTTCTCCCACCTGAACAACCGCC 127849 Query 64897 CCATCACATGGGACTATAATTG-ATATAGTAAAATC--GGCTGTAGAAATTGAAAAGGAA 64953 ||| || | || | ||| | | | || || ||| || | ||||| |||| Sbjct 127848 CCAGCAAACAGG----TTGTTGAAGACATTATCGTCGAGGCCGTCGGCATTGAGCAGGAG 127793 Query 64954 TTCATTACTGCCGCGCTTCCGTGTCGTCTCATCGGCATGGATGCCGATAAGATGAAACAG 65013 ||| | |||| ||| || || | ||| | |||||| | || | |||| ||| Sbjct 127792 TTCCTGACTGACGCTCTGCCCGTTGCTCTGCTGGGCATGAACTCCAAGCTGATGTGTCAG 127733 Query 65014 TATATCGAATTTGTAGCAGATCGCCTGCTTACTCAGTTTGGTATTAAGCCCTACTGGAAT 65073 || ||||| ||||| || || |||||||| | || | ||| |||| || Sbjct 127732 TACATCGAGTTTGTCGCGGACCGCCTGCTGGTGGCCCTCGGCAACAAGAAGTACTACAAC 127673 Query 65074 TCTTCAAATCCATTTGACTGGATGGAGACGATCAGCCTGGAGGGGAAGACTAACTTTTTT 65133 | | || || || |||| |||||| ||||| |||| ||| ||||| ||||| || Sbjct 127672 GCCACCAACCCCTTCGACTTCATGGAGTCGATCTCGCTGGCGGGTAAGACCAACTTCTTC 127613 Query 65134 GAAAAGAGGGTAGGTGATTAC 65154 || ||| ||||||| || ||| Sbjct 127612 GAGAAGCGGGTAGGAGACTAC 127592 >seq45 Length=445819 Score = 123 bits (136), Expect = 3e-23 Identities = 140/185 (76%), Gaps = 2/185 (1%) Strand=Plus/Plus Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474 || |||||||| || || || ||||| ||||| || || || ||||| | || | ||| Sbjct 202348 TTCGTCAAGACCCTCACGGGTAAGACCATTACCCTCGACGTCGAGTCGAGCGACACCATC 202407 Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534 | || | ||| | || || |||||||||||||| || || || || ||||||||||| Sbjct 202408 GACAACGTCAAGACCAAGATCCAGGACAAGGAGGGTATCCCCCCGGATCAGCAGCGTCTT 202467 Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAATGTCCAAAA 27593 || || ||||||||||| || ||||||| || ||||| ||| ||||| || |||| || Sbjct 202468 ATCTTCGCTGGTAAGCAGCTTGAGGATGGCCGCACCCTGAGC-GACTACAACATCCAGAA 202526 Query 27594 GGAAT 27598 || || Sbjct 202527 GGTAT 202531 >seq237 Length=1094385 Score = 104 bits (114), Expect = 3e-17 Identities = 107/139 (77%), Gaps = 1/139 (1%) Strand=Plus/Minus Query 27494 TTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAAC 27553 ||||| |||||||||| || || || |||||||||||||| || || ||||||||||| | Sbjct 4322 TTCAG-ACAAGGAGGGTATCCCCCCGGACCAGCAGCGTCTGATCTTCGCTGGTAAGCAGC 4264 Query 27554 TCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAG 27613 ||||||| | ||||| || | ||||| || |||| ||||| ||||| || || | | Sbjct 4263 TCGAGGACGGCCGTACTCTTTCGGACTACAACATCCAGAAGGAGTCCACCCTCCACTTGG 4204 Query 27614 TCTTGCGTCTTCGCGGTGG 27632 | | || || || ||||| Sbjct 4203 TGCTCCGCCTGCGTGGTGG 4185 >seq248 Length=549880 Score = 89.7 bits (98), Expect = 6e-13 Identities = 106/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 80037 CGTCCGCAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGCATAGA 80096 ||| ||||| |||||||| |||||||| || ||| ||||||||||| | |||||| Sbjct 23706 CGTGCGCAGGTAGTACATACCCGTCTTCAGACCCATCTTCCAGCCGGCAAAGTGCATGCT 23647 Query 80097 ACTGAGCTTCGCAAGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTGACAGAT 80156 ||| ||| | | ||||| | || || | |||||| || ||||||||||| || Sbjct 23646 GGTGATCTTGCCCATGGTGGGCTCCTTCAGGTGGATGTTGAGGGACTGAGACTGGTCAAT 23587 Query 80157 GAAAGCCCCACGATCTGCCGCCAT 80180 ||| || ||||| || || ||||| Sbjct 23586 GAACGCACCACGGTCCGCTGCCAT 23563 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570308190047200