Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001715265.1_202016-08-29] 310 sequences; 36,172,237 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq2 134 3e-26 >seq2 Length=1425683 Score = 134 bits (148), Expect = 3e-26 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 |||||||| |||||||| || ||||| ||||||||||| |||| || || | ||||| Sbjct 869811 AGGACAAGGTGAAGAGTGGATTCTTTCTGGATGTTGTAGTCGGACAAGGTACGGCCATCC 869752 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || | || || |||||||| || | ||||||||||| | ||| |||||||| ||| Sbjct 869751 TCCAACTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCTTCCTTGTCT 869692 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 ||||| || || || | || | |||| ||| || ||||| | || || || Sbjct 869691 TGAATCTTGGTCTTAACGTTATCAATTGTGTCGGAAGATTCAACTTCCAATGTGATCGTC 869632 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || |||||||||||||| ||||||| |||||| Sbjct 869631 TTTCCCGTGAGAGTCTTGACGAAGATCTGCAT 869600 Score = 129 bits (142), Expect = 1e-24 Identities = 160/219 (73%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | ||| || || || ||||| ||| || |||||||||||||||| | || | Sbjct 870046 GAGACGGAGCACCAGGTGCAGAGTGCTCTCCTTCTGGATGTTGTAATCGGAGAGCGTACG 869987 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 |||||||| | || || |||||||| || | ||||||||||| | || || || Sbjct 869986 TCCATCTTCCAACTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGAATGCCCTC 869927 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| |||||||| || ||||| | || | | | || || ||||| || || || || Sbjct 869926 CTTATCTTGAATCTTAGTCTTGACGTTATCAATGGTATCCGAGCTCTCCACCTCCAGCGT 869867 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||| || ||||| || |||||||||||||||| |||||| Sbjct 869866 AATCGTCTTGCCGGTAAGAGTCTTCACGAAGATCTGCAT 869828 Score = 96.9 bits (106), Expect = 8e-15 Identities = 145/204 (71%), Gaps = 4/204 (2%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| || ||||| || || || ||||| |||||||| || | | || | ||||| Sbjct 869583 AGGACGAGGTGAAGGGTGGATTCCTTTTGAATGTTGTAGTCAGACAGGGTACGGCCATCC 869524 Query 151953 TCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTT 152010 || || ||||| || |||||||| || | ||||||||||| | || || ||||| | Sbjct 869523 TCCAGCTGCTTT--CCAGCGAAGATCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGT 869466 Query 152011 CTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAG 152070 | ||||| || || ||| | || | | |||| ||| ||| || ||||| || || | Sbjct 869465 CCTGAATCTTGGTCTTCACATTGTCGATGGTGTCAGAAGACTCCACCTCAAGGGTGATGG 869406 Query 152071 TTTTGCCCGTGAGAGTCTTCACGA 152094 | || || || || ||||| |||| Sbjct 869405 TCTTTCCGGTCAGGGTCTTGACGA 869382 Score = 86.0 bits (94), Expect = 1e-11 Identities = 101/132 (77%), Gaps = 6/132 (5%) Strand=Plus/Minus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAA-AGTTCTCCCAT 151950 |||||||||||| ||||||||||| || ||||||||||| || |||| || | |||| Sbjct 869283 GAGGACAAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTC-ACTAAGCGTGCGGCCAT 869225 Query 151951 CTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTT 152008 | || || ||||| || |||||||| || | ||||||||| | | ||| || ||||| Sbjct 869224 CCTCCAGCTGCTTT--CCCGCGAAGATCAGACGCTGCTGGTCGGGAGGGATGCCCTCCTT 869167 Query 152009 TTCTTGAATTTT 152020 || || || || Sbjct 869166 ATCCTGGATCTT 869155 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153816217168010