Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001715265.1_202016-08-29] 310 sequences; 36,172,237 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq2 172 1e-37 seq45 125 1e-23 seq237 105 1e-17 >seq2 Length=1425683 Score = 172 bits (190), Expect = 1e-37 Identities = 177/229 (77%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG- 282930 ||||||||| || ||||| || || || | ||| |||||| |||||||||||||| | Sbjct 869827 ACCACCACGGAGACGAAGGACAAGGTGAAGAGTGGATTCTTTCTGGATGTTGTAGTCGGA 869768 Query 282931 CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCG 282990 |||| || ||||||||||| | || || || || ||||| | ||| || ||||| | Sbjct 869767 CAAG-GTACGGCCATCCTCCAACTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGG 869709 Query 282991 GAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050 | || || ||||||||||| ||||| | || ||| |||| || ||||| |||| ||| | Sbjct 869708 GGATGCCTTCCTTGTCTTGAATCTTGGTCTTAACGTTATCAATTGTGTCGGAAGATTCAA 869649 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 |||| | ||||||||||| ||||| | |||||| ||||| |||||||| Sbjct 869648 CTTCCAATGTGATCGTCTTTCCCGTGAGAGTCTTGACGAAGATCTGCAT 869600 Score = 159 bits (176), Expect = 7e-34 Identities = 168/221 (76%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||||||||| ||||| || || || | ||| ||| ||||| ||||||||||||| Sbjct 869599 ACCACCACGCAGACGAAGGACGAGGTGAAGGGTGGATTCCTTTTGAATGTTGTAGTCAGA 869540 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || ||||||||||| || || || || || ||||||| ||| || ||||| || Sbjct 869539 CAGGGTACGGCCATCCTCCAGCTGCTTTCCAGCGAAGATCAGACGCTGCTGGTCCGGGGG 869480 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| ||||||||||| || ||||| | || || | ||||| ||||| |||| || || Sbjct 869479 AATGCCCTCCTTGTCCTGAATCTTGGTCTTCACATTGTCGATGGTGTCAGAAGACTCCAC 869420 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATA 283092 || || ||||| ||||| || |||| ||||| |||| || Sbjct 869419 CTCAAGGGTGATGGTCTTTCCGGTCAGGGTCTTGACGACTA 869379 Score = 143 bits (158), Expect = 6e-29 Identities = 154/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||||||||| || || ||||| | || || || ||||||||||||||| Sbjct 869298 ACCACCACGCAGGCGGAGGACAAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCACT 869239 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 |||||||||||||||||| || || || || || ||||||| ||| || ||||| || Sbjct 869238 AAGCGTGCGGCCATCCTCCAGCTGCTTTCCCGCGAAGATCAGACGCTGCTGGTCGGGAGG 869179 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || |||||||| || |||||||| | || ||| | ||||| || || | ||||| Sbjct 869178 GATGCCCTCCTTATCCTGGATCTTGGTCTTGACGTTGTCGATGGTATCGCTGGACTCGAC 869119 Query 283052 TTCGAGAGTGATCGTCTTACCCGT 283075 ||||| ||||| ||||| || || Sbjct 869118 CTCGAGGGTGATGGTCTTGCCGGT 869095 Score = 143 bits (158), Expect = 6e-29 Identities = 170/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || ||||| || || || ||||| || | ||||| || || ||||||||||| || | Sbjct 870054 CCGCCACGGAGACGGAGCACCAGGTGCAGAGTGCTCTCCTTCTGGATGTTGTAATCGGAG 869995 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 ||||| || ||||| || | || || || || ||||| | ||| || ||||| ||| Sbjct 869994 AGCGTACGTCCATCTTCCAACTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGA 869935 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCT-TCGAC 283051 || |||||||| ||||| ||||| | || ||| |||| || || |||| |||| || || Sbjct 869934 ATGCCCTCCTTATCTTGAATCTTAGTCTTGACGTTATCAATGGTATCCG-AGCTCTCCAC 869876 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || || |||||||| || || | |||||| ||||| |||||||| Sbjct 869875 CTCCAGCGTAATCGTCTTGCCGGTAAGAGTCTTCACGAAGATCTGCAT 869828 >seq45 Length=445819 Score = 125 bits (138), Expect = 1e-23 Identities = 135/179 (75%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971 || |||||||||||||| || |||||||||||||| || || || || || ||||| Sbjct 202526 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGATA 202467 Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCG 283031 | ||| || || || || |||||||||||||| |||||||| | || ||| | ||| Sbjct 202466 AGACGCTGCTGATCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCG 202407 Query 283032 ATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090 || ||||| | ||||| ||||| || || ||||||||||| | ||||| ||||| Sbjct 202406 ATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTGAGGGTCTTGACGAA 202348 >seq237 Length=1094385 Score = 105 bits (116), Expect = 1e-17 Identities = 105/136 (77%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||||||||| || |||| || | ||| || || |||||||||||||| | Sbjct 4184 ACCACCACGCAGGCGGAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGA 4243 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| || ||||| ||||| || || || || || ||||||| ||| || ||||| || Sbjct 4244 AAGAGTACGGCCGTCCTCGAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCCGGGGG 4303 Query 282992 AATACCCTCCTTGTCT 283007 ||||||||||||||| Sbjct 4304 GATACCCTCCTTGTCT 4319 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046735042482740