Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001741885.1_202016-09-21] 319 sequences; 34,635,689 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq2 197 1e-45 seq315 132 5e-26 seq59 125 7e-24 seq274 98.7 1e-15 seq285 86.0 6e-12 >seq2 Length=188096 Score = 197 bits (218), Expect = 1e-45 Identities = 215/285 (75%), Gaps = 3/285 (1%) Strand=Plus/Plus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| ||||||||||| || |||||||||| |||||| | || ||| Sbjct 159634 ATCTGGCAGATGTACAAGAAGGCCGAGGCTTCTTTCTGGACCGCCGAGGAAATCGATCTG 159693 Query 116696 TCCAAGGACACGAGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752 |||||||| | ||||||| | ||| |||||||| |||||||| | |||||| Sbjct 159694 TCCAAGGATTTGCACGACTGGCACAACCGCCTGAACGACGACGAGCGCTACTTCATCTCC 159753 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 ||||| || || || ||||| ||| ||| ||||| ||||||||||| || |||||||| Sbjct 159754 CACGTTCTCGCGTTCTTCGCTGCCTCCGATGGCATTGTCAACGAGAACCTTGTCGAGCGC 159813 Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATG 116872 ||| ||||| ||||| | ||||| || ||||||||||| || |||||| ||| Sbjct 159814 TTCAGCGGCGAGGTCCAGGTTCCTGAGGCTCGTTGCTTCTACGGATTCCAGATCATGATG 159873 Query 116873 GAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTAC 116917 |||||| | ||||| || | || || ||| ||||| || ||| Sbjct 159874 GAGAACATCCACTCCGAGACCTACTCTCTCCTGATCGATACCTAC 159918 Score = 188 bits (208), Expect = 7e-43 Identities = 304/437 (70%), Gaps = 0/437 (0%) Strand=Plus/Plus Query 116982 AGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCC 117041 |||||||||| ||||| | |||||| | ||| ||| | |||||| |||| | Sbjct 160036 AGAAGGCCGATTGGGCCATTAAGTGGATCCAGGACAGGGAGTCGACCTTCGCTCAGCGTC 160095 Query 117042 TGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTT 117101 | || || ||||| ||||| ||||| ||||||| || ||| ||||| |||| || | Sbjct 160096 TCGTTGCTTTCGCTGCCGTTGAGGGTATCTTCTTCTCCGGCTCCTTCGCTTCCATCTTCT 160155 Query 117102 GGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGG 117161 |||||||||| || || |||||||| || || || ||| ||||||||||||||| | | Sbjct 160156 GGCTCAAGAAGCGTGGTCTCATGCCTGGTCTCACCTTCTCCAACGAGCTCATCTCTCGTG 160215 Query 117162 ACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGA 117221 ||||||||||||| |||||| || || |||||||| || || | || || | Sbjct 160216 ACGAGGGTCTGCACACCGACTTCGCTTGCCTGCTGTTCTCCCACCTGAACAACCGCCCCA 160275 Query 117222 GCGCGGCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCA 117281 || | || || || || ||| || |||| ||| |||||| ||||| | Sbjct 160276 GCAAACAGGTTGTTGAAGACATTATCGTCGAGGCCGTCGGCATTGAGCAGGAGTTCCTGA 160335 Query 117282 CCGAAGCGCTGCCGGTGCGTCTGCTGGGACTCAATTGCGAAACGATGTCGCAATACATCG 117341 | || || ||||| || ||||||||| | || | | | ||||| || ||||||| Sbjct 160336 CTGACGCTCTGCCCGTTGCTCTGCTGGGCATGAACTCCAAGCTGATGTGTCAGTACATCG 160395 Query 117342 AGTTCGTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGCCCA 117401 |||| ||||| ||| | |||||| | | || | | | ||| |||||||| | ||| Sbjct 160396 AGTTTGTCGCGGACCGCCTGCTGGTGGCCCTCGGCAACAAGAAGTACTACAACGCCACCA 160455 Query 117402 ACCCGCTGGACTTTATG 117418 |||| | ||||| ||| Sbjct 160456 ACCCCTTCGACTTCATG 160472 >seq315 Length=240848 Score = 132 bits (146), Expect = 5e-26 Identities = 140/182 (77%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758 ||||| || || |||||||| || ||||| ||| |||||||||| | | ||||| | | Sbjct 200006 TTCGTCAAGACCCTCACGGGTAAGACCATTACCCTCGACGTCGAGTCGAGCGACACCATC 199947 Query 40759 CA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACT 40817 | |||| ||||| || || | ||||| ||||| |||||| |||| ||||| || || Sbjct 199946 GACAACG-TCAAGACCAAGATCCAGGACAAGGAGGGTATCCCCCCGGATCAGCAGCGTCT 199888 Query 40818 CATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAA 40877 |||| ||| || || ||||| || || | |||||||| | |||||||||||||||||| Sbjct 199887 TATCTTCGCTGGTAAGCAGCTTGAGGATGGCCGCACCCTGAGCGACTACAACATCCAGAA 199828 Query 40878 GG 40879 || Sbjct 199827 GG 199826 >seq59 Length=229715 Score = 125 bits (138), Expect = 7e-24 Identities = 153/206 (74%), Gaps = 2/206 (1%) Strand=Plus/Plus Query 40712 TCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA-AACGCTCAAG 40770 |||| ||||| ||||||||| |||| ||||| ||| ||| | | | | |||| ||||| Sbjct 31682 TCACCGGCAAGACCATCACCCTCGAGGTCGAGTCCAGCGATACCATCGACAACG-TCAAG 31740 Query 40771 GAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGC 40830 || || | || || ||||||||||| | |||||||| || || |||| ||| || Sbjct 31741 ACCAAGATCCAGGATAAGGAGGGCATCCCTCCCGACCAGCAGCGTCTGATCTTCGCCGGA 31800 Query 40831 AAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTG 40890 || |||||||| || | ||||| || | ||||||||||||||||||||| | || || Sbjct 31801 AAGCAGCTGGAGGATGGCCGCACGCTTAGTGACTACAACATCCAGAAGGAGTCTACTCTC 31860 Query 40891 CATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||||| || | ||| || | || || Sbjct 31861 CATCTTGTCCTCCGCCTGCGTGGTGG 31886 Score = 113 bits (124), Expect = 5e-20 Identities = 153/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || || ||||| || || || | || || || | | Sbjct 32417 ATGCAGATCTTCGTGAAGACTCTTACCGGCAAGACGATTACGCTGGAGGTGGAGAGCTCG 32476 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | | | |||| ||||| || |||| || || |||||||| ||| ||||||| Sbjct 32477 GATACCATTGATAACG-TCAAGACTAAGATTCAAGATAAGGAGGGCATTCCCCCGGACCA 32535 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||||| ||| || || ||| |||| || | || || ||| ||| ||||| Sbjct 32536 GCAGCGTCTCATCTTCGCTGGTAAGCAGTTGGAAGATGGACGTACGCTCTCCGATTACAA 32595 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 ||||||||||||| ||| ||||| || ||| Sbjct 32596 CATCCAGAAGGAGAGCACTCTGCACCTGGTG 32626 Score = 111 bits (122), Expect = 2e-19 Identities = 152/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || |||||||| || || ||||| | || || ||| | || Sbjct 32189 ATGCAGATCTTCGTCAAGACTCTCACGGGAAAGACGATCACATTGGAAGTTGAATCTTCC 32248 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| | ||| || |||| ||||| || ||||||||| ||||||| Sbjct 32249 GACACAATTGATAACGTT-AAGACCAAGATTCAAGACAAGGAAGGCATCCCCCCGGACCA 32307 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || | |||| ||| || || ||| |||| || | || ||| | ||||||||| Sbjct 32308 GCAGCGTTTGATCTTCGCTGGTAAGCAGTTGGAGGATGGCCGTACCTTGTCCGACTACAA 32367 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||||| || |||| || || || || Sbjct 32368 CATCCAGAAAGAATCCACTCTTCACCTTGT 32397 Score = 98.7 bits (108), Expect = 1e-15 Identities = 143/202 (71%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 40697 TATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCG 40756 || |||| || || || || || || ||||||||| | || || || | | |||| | Sbjct 31968 TAGTCGTCAAGACCCTGACCGGAAAGACCATCACCCTTGAGGTGGAGTCTTCTGACACCA 32027 Query 40757 TGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGAC 40816 | | | | ||| || |||| ||||| |||||||| ||| |||||||||| || | Sbjct 32028 TCGACAATGTGAAGACCAAGATTCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGTC 32087 Query 40817 TCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGA 40876 | |||| ||| || || |||||||| || | || ||||| ||||||||||| || | Sbjct 32088 TGATCTTCGCTGGAAAGCAGCTGGAGGATGGCCGTACCCTGTCTGACTACAACATTCAAA 32147 Query 40877 AGGAGGCCACGCTGCATCTAGT 40898 |||| |||| || || || || Sbjct 32148 AGGAATCCACCCTTCACCTCGT 32169 >seq274 Length=270511 Score = 98.7 bits (108), Expect = 1e-15 Identities = 104/137 (76%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842 ||||| ||||| |||||| |||||||||| || || |||| ||| || || ||||| || Sbjct 267056 GACAAGGAGGGTATCCCCCCGGACCAGCAGCGTCTGATCTTCGCTGGTAAGCAGCTCGAG 267115 Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902 |||| || || || ||||||||||||||||||||| |||| || || | ||| | Sbjct 267116 GACGGCCGTACTCTTTCGGACTACAACATCCAGAAGGAGTCCACCCTCCACTTGGTGCTC 267175 Query 40903 CGCTTGAGGGGCGGCGG 40919 ||| || | || || || Sbjct 267176 CGCCTGCGTGGTGGTGG 267192 >seq285 Length=592309 Score = 86.0 bits (94), Expect = 6e-12 Identities = 102/136 (75%), Gaps = 2/136 (1%) Strand=Plus/Plus Query 139382 GGCTTCCACGTGCACGAGTTCGGCGACGCGAGCAACGGGTGCACGTCGGCCGGCGAGCAC 139441 ||||||||||| ||| ||||||| ||| | |||||| ||||| || || ||| ||| Sbjct 310927 GGCTTCCACGTCCACCAGTTCGGTGACAACACCAACGGCTGCACCTCCGCTGGCCCTCAC 310986 Query 139442 TTCAACCCCGCGCGCCGGGACCACGGCGCGCCCGACGCCGA-GATCAGGCACGTCGGCGA 139500 ||||||||| || | |||||| || ||||| | ||| || | | |||||||| || Sbjct 310987 TTCAACCCCTTCGGCAAGACCCACGGTGCTCCCGAGGACGACGAGC-GTCACGTCGGTGA 311045 Query 139501 CCTGGGCAACCTCGAG 139516 ||| |||||| || || Sbjct 311046 CCTTGGCAACTTCAAG 311061 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515217145563440