Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001741885.1_202016-09-21] 319 sequences; 34,635,689 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq2 95.1 1e-14 >seq2 Length=188096 Score = 95.1 bits (104), Expect = 1e-14 Identities = 158/226 (70%), Gaps = 2/226 (1%) Strand=Plus/Plus Query 50632 GAAGCCGTCGACATCGAAAAAGAGTTTTTCACGGACGCTTTACCCGTGGCATTGTTGGGC 50691 || ||||||| ||| || | ||||| | || |||||| | ||||| || || ||||| Sbjct 160305 GAGGCCGTCGGCATTGAGCAGGAGTTCCTGACTGACGCTCTGCCCGTTGCTCTGCTGGGC 160364 Query 50692 ATGAACGCAGACATGATGTGCGAGTACATTGAGTTTGTTGCAGACAGATTGTTGTTGCAG 50751 |||||| | | ||||||| ||||||| |||||||| || ||| | || || || Sbjct 160365 ATGAACTCCAAGCTGATGTGTCAGTACATCGAGTTTGTCGCGGACCGCCTGCTGGTGGCC 160424 Query 50752 CTGGGACAAC-CGAAATACTATAATGCACGTAACCCCTTTCCGTTTATGAATAACATATC 50810 || || |||| ||| ||||| || || |||||||| || ||| | || || Sbjct 160425 CTCGG-CAACAAGAAGTACTACAACGCCACCAACCCCTTCGACTTCATGGAGTCGATCTC 160483 Query 50811 GTTGGAGGGCAAAACAAACTTTTTCGAAAGACGTGTAGGCGAATAC 50856 | ||| ||| || || ||||| ||||| | || ||||| || ||| Sbjct 160484 GCTGGCGGGTAAGACCAACTTCTTCGAGAAGCGGGTAGGAGACTAC 160529 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 507012378280080