Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001741885.1_202016-09-21] 319 sequences; 34,635,689 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq2 87.8 2e-12 >seq2 Length=188096 Score = 87.8 bits (96), Expect = 2e-12 Identities = 232/350 (66%), Gaps = 17/350 (5%) Strand=Plus/Minus Query 119642 CTTGTACTCGCCCACACGTTTTTCaaaaaaaTTAGTCTTGCCCTCAAGAGATATGTTATT 119701 || ||| || || || || || || || || || ||||| ||| | || || || | Sbjct 160532 CTGGTAGTCTCCTACCCGCTTCTCGAAGAAGTTGGTCTTACCCGCCAGCGAGATCGACTC 160473 Query 119702 CATAAACTCGAAAGGATTTGCAGTGTTGAAATGCTTGTCGTAGCCCAACTCGAACAACAG 119761 ||| || ||||| || || | | |||| | | ||| | || ||| | | | || ||| Sbjct 160472 CATGAAGTCGAAGGGGTTGGTGGCGTTGTAGTACTTCTTGTTGCCGAGGGCCACCAGCAG 160413 Query 119762 TCGATCTGCCACAAACTCGATGTATTCGCACAT-GGATTGCGAATTCATGCCCAACATAG 119820 || || || |||||||||||||| | ||||| | ||| || |||||||||| || || Sbjct 160412 GCGGTCCGCGACAAACTCGATGTACTGACACATCAGCTTG-GAGTTCATGCCCAGCAGAG 160354 Query 119821 CGACCGGTAAAGCATTGGTAAAGAAATCCTTTTCAATGTCGACCGCTTCTAC--AAACAT 119878 | || || | ||| | || | ||| |||| |||||| |||| || || || || | Sbjct 160353 CAACGGGCAGAGCGTCAGTCAGGAACTCCTGCTCAATGCCGACGGCCTCGACGATAATGT 160294 Query 119879 ACTCAAC-ACCTTGGTCTTGGAGAGCTTGTTCTTTTCGGGAATATATTTATTGTAGTATA 119937 ||||| |||| | ||| | | |||||| | |||| | | | Sbjct 160293 CTTCAACAACCTGTTTGCTGGGGCGGTTGTTCAGGT-GGGA-----------GAACAGCA 160246 Query 119938 GACAAGCAAAGTCGGTGTGTAGTCCTTCGTCTCTGGAAATGAGTTCGTTG 119987 | ||||| ||||||||||| || || ||||| | || ||||| |||||| Sbjct 160245 GGCAAGCGAAGTCGGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTG 160196 Score = 86.0 bits (94), Expect = 6e-12 Identities = 125/177 (71%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 120325 GCTCGATGATGTTAGTGTTCACGATGACGTCGGCGGCAGCGAAAAACGCGAGAACGTGCT 120384 |||||| | ||| ||| || ||| | |||| ||||||||| |||||||||||||| Sbjct 159811 GCTCGACAAGGTTCTCGTTGACAATGCCATCGGAGGCAGCGAAGAACGCGAGAACGTGGG 159752 Query 120385 TAAGAAAAAATCGTTCTTTATCGTTCAGTTTTTTGTTCCAATCGTCAAAGTCCTTGGACA 120444 | || | || || | |||||||| |||| ||| |||| || |||||||||| Sbjct 159751 AGATGAAGTAGCGCTCGTCGTCGTTCAGGCGGTTGTGCCAGTCGTGCAAATCCTTGGACA 159692 Query 120445 TGTCGATCTCTTCGACTTTCCAGTGACAATCGACCGCTTTCTTGTACGATTGCCAGA 120501 ||||| || ||| | ||||| | || | | || ||||||||| ||||||| Sbjct 159691 GATCGATTTCCTCGGCGGTCCAGAAAGAAGCCTCGGCCTTCTTGTACATCTGCCAGA 159635 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478660491333680