Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001741885.1_202016-09-21] 319 sequences; 34,635,689 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq2 152 5e-32 seq59 118 1e-21 seq274 98.7 9e-16 >seq2 Length=188096 Score = 152 bits (168), Expect = 5e-32 Identities = 340/504 (67%), Gaps = 15/504 (3%) Strand=Plus/Plus Query 46098 CAAGAAAACCGACTGGGCGATGAAGTGGATCAACAGCAGCACCGCGACTTTCGCCGAGCG 46157 |||||| |||| ||||| || ||||||||| | ||| |||| ||||| |||| Sbjct 160034 CAAGAAGGCCGATTGGGCCATTAAGTGGATCCAGGACAGGGAGTCGACCTTCGCTCAGCG 160093 Query 46158 TATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGTTTTGCCGCCATCTT 46217 | | || || || || || ||||| |||| || || ||| || || ||||||| Sbjct 160094 TCTCGTTGCTTTCGCTGCCGTTGAGGGTATCTTCTTCTCCGGCTCCTTCGCTTCCATCTT 160153 Query 46218 TTACATCAA-AACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAACGAGCTGATATCGC 46276 | |||| || | || | ||||||| || || || || ||||||||| || || | Sbjct 160154 CTGGCTCAAGAAGCGTGGTC-TCATGCCTGGTCTCACCTTCTCCAACGAGCTCATCTCTC 160212 Query 46277 GCGACGAGGGCCTGCATACGGACTTTGCGTGTCTCTACTATAACACTCGCGTGCACGACA 46336 | |||||||| ||||| || ||||| || || || || | | | | | || || || Sbjct 160213 GTGACGAGGGTCTGCACACCGACTTCGCTTGCCTG--CTGTT-CTCCCACCTGAACAACC 160269 Query 46337 AGCTTGCGCCCG---ACACCGTGCTGAG--CATGTTCAAGGAGGCGGTGGCCATTGAGAA 46391 || || | ||| || ||| ||| || ||||| || | ||||||| | Sbjct 160270 -----GCCCCAGCAAACAGGTTGTTGAAGACATTATCGTCGAGGCCGTCGGCATTGAGCA 160324 Query 46392 GGAGTTTTTTACGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAACGCACAGTCAATGTG 46451 |||||| | || | ||| ||||||| ||| ||||||||||||||| | || ||||| Sbjct 160325 GGAGTTCCTGACTGACGCTCTGCCCGTTGCTCTGCTGGGCATGAACTCCAAGCTGATGTG 160384 Query 46452 CGACTACATCGAGTTTGTAGCGGACCGACTGCTCGTGCAGCTTCACCAGCCGAAGCATTT 46511 | |||||||||||||| |||||||| ||||| ||| || | | |||| | | Sbjct 160385 TCAGTACATCGAGTTTGTCGCGGACCGCCTGCTGGTGGCCCTCGGCAACAAGAAGTACTA 160444 Query 46512 TCACGCGCGCAATCCATTTGAGTTTATGAACAACATCTCCCTGGAGGGCAAAACTAATTT 46571 |||| ||| || || || || ||| | ||||| |||| ||| || || || || Sbjct 160445 CAACGCCACCAACCCCTTCGACTTCATGGAGTCGATCTCGCTGGCGGGTAAGACCAACTT 160504 Query 46572 TTTCGAAAAGCGCGTCGGCGAGTA 46595 ||||| ||||| || || || || Sbjct 160505 CTTCGAGAAGCGGGTAGGAGACTA 160528 >seq59 Length=229715 Score = 118 bits (130), Expect = 1e-21 Identities = 148/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| || || || | ||| | || |||||||| || |||||||| || || Sbjct 31886 CCACCACGCAGGCGGAGGACAAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCACTA 31827 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| |||||||| || ||| |||| | |||||||||||| |||||| Sbjct 31826 AGCGTGCGGCCATCCTCCAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGGTCGGGAGGG 31767 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || || || ||| || ||||| | || | |||||| ||||||||| Sbjct 31766 ATGCCCTCCTTATCCTGGATCTTGGTCTTGACGTTGTCGATGGTATCGCTGGACTCGACC 31707 Query 131188 TCGACGGTAACGGTTTTACCGGT 131210 |||| ||| | ||| || ||||| Sbjct 31706 TCGAGGGTGATGGTCTTGCCGGT 31684 Score = 98.7 bits (108), Expect = 9e-16 Identities = 152/217 (70%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| ||| || || | || | ||| || ||||||||||||||||| || | Sbjct 32187 CCACCACGCAGACGAAGGACGAGGTGAAGGGTGGATTCCTTTTGAATGTTGTAGTCAGAC 32128 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || ||||| |||||||| || ||| |||| | ||||||||||||||| || Sbjct 32127 AGGGTACGGCCATCCTCCAGCTGCTTTCCAGCGAAGATCAGACGCTGCTGGTCCGGGGGA 32068 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| || || ||| | | || | || || | ||||| | Sbjct 32067 ATGCCCTCCTTGTCCTGAATCTTGGTCTTCACATTGTCGATGGTGTCAGAAGACTCCACC 32008 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224 || | ||| | ||| || ||||| || || || |||| Sbjct 32007 TCAAGGGTGATGGTCTTTCCGGTCAGGGTCTTGACGA 31971 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || | || | || || || || || |||||||| ||| | Sbjct 32415 CCACCACGGAGACGAAGGACAAGGTGAAGAGTGGATTCTTTCTGGATGTTGTAGTCGGAC 32356 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || ||||| | |||||| || ||| |||| ||||||||||||||||| ||| Sbjct 32355 AAGGTACGGCCATCCTCCAACTGCTTACCAGCGAAGATCAAACGCTGCTGGTCCGGGGGG 32296 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| || || ||| | | || | || |||| || || | Sbjct 32295 ATGCCTTCCTTGTCTTGAATCTTGGTCTTAACGTTATCAATTGTGTCGGAAGATTCAACT 32236 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | || || || || ||||| || ||||| |||||||| Sbjct 32235 TCCAATGTGATCGTCTTTCCCGTGAGAGTCTTGACGAAGATCTGCAT 32189 >seq274 Length=270511 Score = 98.7 bits (108), Expect = 9e-16 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| || ||||| || || | ||| |||||||| || |||||||| || Sbjct 267189 CCACCACGCAGGCGGAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAA 267130 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || |||||| |||||||| || ||| |||| | ||||||||||||||| ||| Sbjct 267129 AGAGTACGGCCGTCCTCGAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCCGGGGGG 267070 Query 131128 ATTCCTTCTTTGTC 131141 || || || ||||| Sbjct 267069 ATACCCTCCTTGTC 267056 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472010917848960