Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001741885.1_202016-09-21] 319 sequences; 34,635,689 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq252 109 4e-19 >seq252 Length=184822 Score = 109 bits (120), Expect = 4e-19 Identities = 199/291 (68%), Gaps = 8/291 (3%) Strand=Plus/Minus Query 6201 TTCTACCGCTACAAAATGCCGCGCATCTGCGCCAAGGTCGAGGGTAAGGGAAACGGTATT 6260 |||||||| ||||| ||| |||| | ||||| | ||||| ||||| |||||||| Sbjct 98489 TTCTACCGTTACAAGATGGAGCGCCTTCAGTCCAAGATTGAGGGCAAGGGCAACGGTATC 98430 Query 6261 AAAACCGTCATTGTCAACATGCCTGAA----GTCGCTAAGGCGCTCGGACGCCCTGCCAC 6316 || |||||| | |||||| ||||| |||||| || ||||| | || ||| | | Sbjct 98429 AAGACCGTCGTCGTCAAC----CTGAACTCGGTCGCTCAGTCGCTCAGTCGGCCTCCGTC 98374 Query 6317 CTACCCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAAAA 6376 ||| || || || || || | ||| || || |||||| | | | | || | Sbjct 98373 TTACGTGATCAAGTACTTTGGCTTCGAGCTGGGTGCTCAGGCCAACGCCAAGCCCACCGA 98314 Query 6377 CGAGCGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGACGG 6436 || |||| ||| | ||||| | ||| | | ||||||| || |||| || ||||| Sbjct 98313 TGATCGCTGGATCATCAACGGTGCCCATGATGCCCCCAAGCTTCAAGACTATCTGGACGG 98254 Query 6437 CTTTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCGA 6487 ||||||| |||||| |||||||| | |||| | || ||||| || || Sbjct 98253 CTTTATTTCCAAGTTCGTGCTGTGCAAGAAATGTAAGAATCCGGAAACGGA 98203 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334945897788089